Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
NcanP55066 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
NcanP55066 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NcanP55066 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NcanP55066 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
NcanP55066 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.37□□□□□ -0.43
NcanP55066 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.37□□□□□ -0.43
NcanP55066 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.37□□□□□ -0.43
NcanP55066 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC12.37□□□□□ -0.43
NcanP55066 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
NcanP55066 Gm11540-201ENSMUST00000117457 780 ntBASIC12.37□□□□□ -0.43
NcanP55066 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.37□□□□□ -0.43
NcanP55066 Gm13827-201ENSMUST00000148801 372 ntBASIC12.37□□□□□ -0.43
NcanP55066 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.37□□□□□ -0.43
NcanP55066 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC12.37□□□□□ -0.43
NcanP55066 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.37□□□□□ -0.43
NcanP55066 CT571271.1-201ENSMUST00000227071 670 ntBASIC12.37□□□□□ -0.43
NcanP55066 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
NcanP55066 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC12.37□□□□□ -0.43
NcanP55066 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
NcanP55066 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.37□□□□□ -0.43
NcanP55066 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
NcanP55066 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NcanP55066 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.36□□□□□ -0.43
NcanP55066 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
NcanP55066 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
NcanP55066 Gm15626-201ENSMUST00000117478 868 ntBASIC12.36□□□□□ -0.43
NcanP55066 Gm15136-201ENSMUST00000120552 533 ntBASIC12.36□□□□□ -0.43
NcanP55066 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.36□□□□□ -0.43
NcanP55066 Gm25569-201ENSMUST00000157175 131 ntBASIC12.36□□□□□ -0.43
NcanP55066 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
NcanP55066 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.36□□□□□ -0.43
NcanP55066 Gm8234-201ENSMUST00000198523 1107 ntBASIC12.36□□□□□ -0.43
NcanP55066 Gm43726-201ENSMUST00000199110 775 ntBASIC12.36□□□□□ -0.43
NcanP55066 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC12.36□□□□□ -0.43
NcanP55066 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
NcanP55066 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.36□□□□□ -0.43
NcanP55066 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
NcanP55066 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
NcanP55066 Mir341-201ENSMUST00000093593 96 ntBASIC12.36□□□□□ -0.43
NcanP55066 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
NcanP55066 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
NcanP55066 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC12.36□□□□□ -0.43
NcanP55066 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
NcanP55066 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NcanP55066 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms