Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Fdft1P53798 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Fdft1P53798 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.79□□□□□ -0.52
Fdft1P53798 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Fdft1P53798 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Fdft1P53798 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.78□□□□□ -0.52
Fdft1P53798 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Fdft1P53798 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Fdft1P53798 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Fdft1P53798 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Fdft1P53798 Gm5419-201ENSMUST00000119301 527 ntBASIC11.78□□□□□ -0.52
Fdft1P53798 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Fdft1P53798 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Fdft1P53798 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.78□□□□□ -0.52
Fdft1P53798 Gm45331-201ENSMUST00000209868 554 ntBASIC11.78□□□□□ -0.52
Fdft1P53798 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.78□□□□□ -0.52
Fdft1P53798 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.78□□□□□ -0.52
Fdft1P53798 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Fdft1P53798 Olfr582-201ENSMUST00000098212 960 ntBASIC11.78□□□□□ -0.52
Fdft1P53798 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.78□□□□□ -0.52
Fdft1P53798 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Fdft1P53798 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.78□□□□□ -0.52
Fdft1P53798 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.78□□□□□ -0.52
Fdft1P53798 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Fdft1P53798 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Fdft1P53798 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Fdft1P53798 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Fdft1P53798 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fdft1P53798 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Fdft1P53798 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fdft1P53798 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Fdft1P53798 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Fdft1P53798 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.77□□□□□ -0.53
Fdft1P53798 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Fdft1P53798 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Gm45598-202ENSMUST00000210719 986 ntBASIC11.77□□□□□ -0.53
Fdft1P53798 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.77□□□□□ -0.53
Fdft1P53798 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Fdft1P53798 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Fdft1P53798 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.77□□□□□ -0.53
Fdft1P53798 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Fdft1P53798 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Fdft1P53798 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Fdft1P53798 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Fdft1P53798 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Fdft1P53798 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.76□□□□□ -0.53
Fdft1P53798 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Fdft1P53798 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms