Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Sox3P53784 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox3P53784 Gm12628-201ENSMUST00000122193 382 ntBASIC11.33□□□□□ -0.6
Sox3P53784 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox3P53784 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox3P53784 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox3P53784 Gm25881-201ENSMUST00000157783 103 ntBASIC11.33□□□□□ -0.6
Sox3P53784 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.33□□□□□ -0.6
Sox3P53784 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Gm9230-201ENSMUST00000188228 532 ntBASIC11.33□□□□□ -0.6
Sox3P53784 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox3P53784 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox3P53784 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Gm19091-201ENSMUST00000208120 978 ntBASIC11.33□□□□□ -0.6
Sox3P53784 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox3P53784 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.33□□□□□ -0.6
Sox3P53784 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.33□□□□□ -0.6
Sox3P53784 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.33□□□□□ -0.6
Sox3P53784 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.33□□□□□ -0.6
Sox3P53784 Gm270-201ENSMUST00000223010 976 ntBASIC11.33□□□□□ -0.6
Sox3P53784 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.33□□□□□ -0.6
Sox3P53784 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Sox3P53784 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Sox3P53784 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Sox3P53784 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Sox3P53784 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox3P53784 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox3P53784 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox3P53784 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Sox3P53784 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox3P53784 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Gm11801-201ENSMUST00000117807 746 ntBASIC11.32□□□□□ -0.6
Sox3P53784 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.32□□□□□ -0.6
Sox3P53784 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.32□□□□□ -0.6
Sox3P53784 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Gm10774-201ENSMUST00000188689 204 ntBASIC11.32□□□□□ -0.6
Sox3P53784 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox3P53784 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox3P53784 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sox3P53784 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC11.32□□□□□ -0.6
Sox3P53784 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Sox3P53784 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox3P53784 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Sox3P53784 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.32□□□□□ -0.6
Sox3P53784 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.32□□□□□ -0.6
Sox3P53784 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Sox3P53784 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Sox3P53784 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox3P53784 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Sox3P53784 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Sox3P53784 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox3P53784 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Sox3P53784 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms