Protein–RNA interactions for Protein: P50207

Hoxc13, Homeobox protein Hox-C13, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc13P50207 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc13P50207 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc13P50207 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc13P50207 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc13P50207 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc13P50207 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc13P50207 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc13P50207 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc13P50207 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc13P50207 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxc13P50207 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc13P50207 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.8□□□□□ -0.36
Hoxc13P50207 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hoxc13P50207 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc13P50207 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc13P50207 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc13P50207 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Gm25148-201ENSMUST00000104611 123 ntBASIC12.8□□□□□ -0.36
Hoxc13P50207 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxc13P50207 Gm12029-201ENSMUST00000120073 832 ntBASIC12.8□□□□□ -0.36
Hoxc13P50207 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc13P50207 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC12.8□□□□□ -0.36
Hoxc13P50207 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxc13P50207 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.8□□□□□ -0.36
Hoxc13P50207 Gm19459-201ENSMUST00000176240 835 ntBASIC12.8□□□□□ -0.36
Hoxc13P50207 Gm9645-201ENSMUST00000197131 792 ntBASIC12.8□□□□□ -0.36
Hoxc13P50207 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.8□□□□□ -0.36
Hoxc13P50207 Gm5996-201ENSMUST00000211110 718 ntBASIC12.8□□□□□ -0.36
Hoxc13P50207 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.8□□□□□ -0.36
Hoxc13P50207 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC12.8□□□□□ -0.36
Hoxc13P50207 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxc13P50207 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.79□□□□□ -0.36
Hoxc13P50207 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Gm14740-201ENSMUST00000118538 1150 ntBASIC12.79□□□□□ -0.36
Hoxc13P50207 Gm15329-201ENSMUST00000121408 155 ntBASIC12.79□□□□□ -0.36
Hoxc13P50207 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Gm25492-201ENSMUST00000157383 129 ntBASIC12.79□□□□□ -0.36
Hoxc13P50207 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Mir7076-201ENSMUST00000183519 74 ntBASIC12.79□□□□□ -0.36
Hoxc13P50207 Gm3508-201ENSMUST00000186012 792 ntBASIC12.79□□□□□ -0.36
Hoxc13P50207 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Gm44126-201ENSMUST00000204831 514 ntBASIC12.79□□□□□ -0.36
Hoxc13P50207 AC124433.1-201ENSMUST00000224483 1063 ntBASIC12.79□□□□□ -0.36
Hoxc13P50207 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.79□□□□□ -0.36
Hoxc13P50207 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.79□□□□□ -0.36
Hoxc13P50207 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.79□□□□□ -0.36
Hoxc13P50207 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxc13P50207 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms