Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.4□□□□□ -0.42
LmnaP48678 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LmnaP48678 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
LmnaP48678 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
LmnaP48678 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
LmnaP48678 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
LmnaP48678 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Gm23251-201ENSMUST00000103773 110 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Gm24541-201ENSMUST00000103871 96 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Gm15515-201ENSMUST00000117827 822 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Gm9630-201ENSMUST00000178304 885 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
LmnaP48678 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.39□□□□□ -0.43
LmnaP48678 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Gm34023-201ENSMUST00000195539 217 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.39□□□□□ -0.43
LmnaP48678 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Gm19187-201ENSMUST00000206781 892 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Gm34272-201ENSMUST00000208886 253 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.39□□□□□ -0.43
LmnaP48678 CT025561.1-201ENSMUST00000214972 674 ntBASIC12.39□□□□□ -0.43
LmnaP48678 CT025552.1-201ENSMUST00000224561 521 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Prl7a1-203ENSMUST00000224852 1283 ntBASIC12.39□□□□□ -0.43
LmnaP48678 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
LmnaP48678 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.39□□□□□ -0.43
LmnaP48678 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.39□□□□□ -0.43
LmnaP48678 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC12.39□□□□□ -0.43
LmnaP48678 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
LmnaP48678 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.38□□□□□ -0.43
LmnaP48678 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.38□□□□□ -0.43
LmnaP48678 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
LmnaP48678 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
LmnaP48678 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.38□□□□□ -0.43
LmnaP48678 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
LmnaP48678 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
LmnaP48678 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.38□□□□□ -0.43
LmnaP48678 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
LmnaP48678 Gm15881-201ENSMUST00000148792 942 ntBASIC12.38□□□□□ -0.43
LmnaP48678 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC12.38□□□□□ -0.43
LmnaP48678 Rmrp-201ENSMUST00000157463 271 ntBASIC12.38□□□□□ -0.43
LmnaP48678 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC12.38□□□□□ -0.43
LmnaP48678 Gm44251-201ENSMUST00000204963 442 ntBASIC12.38□□□□□ -0.43
LmnaP48678 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.38□□□□□ -0.43
LmnaP48678 Gm45166-201ENSMUST00000209073 683 ntBASIC12.38□□□□□ -0.43
LmnaP48678 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.38□□□□□ -0.43
LmnaP48678 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.38□□□□□ -0.43
LmnaP48678 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.38□□□□□ -0.43
LmnaP48678 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.38□□□□□ -0.43
LmnaP48678 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.38□□□□□ -0.43
LmnaP48678 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.38□□□□□ -0.43
LmnaP48678 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
LmnaP48678 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.38□□□□□ -0.43
LmnaP48678 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.38□□□□□ -0.43
LmnaP48678 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
LmnaP48678 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms