Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Prox1P48437 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Prox1P48437 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Prox1P48437 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.32□□□□□ -0.6
Prox1P48437 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Prox1P48437 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Prox1P48437 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Prox1P48437 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.32□□□□□ -0.6
Prox1P48437 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Prox1P48437 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.32□□□□□ -0.6
Prox1P48437 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Prox1P48437 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Gm11591-201ENSMUST00000120063 702 ntBASIC11.32□□□□□ -0.6
Prox1P48437 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.32□□□□□ -0.6
Prox1P48437 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.32□□□□□ -0.6
Prox1P48437 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.32□□□□□ -0.6
Prox1P48437 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.32□□□□□ -0.6
Prox1P48437 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Prox1P48437 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.32□□□□□ -0.6
Prox1P48437 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.32□□□□□ -0.6
Prox1P48437 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.32□□□□□ -0.6
Prox1P48437 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Prox1P48437 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.32□□□□□ -0.6
Prox1P48437 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Prox1P48437 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Prox1P48437 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Prox1P48437 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.32□□□□□ -0.6
Prox1P48437 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Prox1P48437 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Prox1P48437 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
Prox1P48437 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Prox1P48437 Gm23912-201ENSMUST00000104687 87 ntBASIC11.31□□□□□ -0.6
Prox1P48437 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Prox1P48437 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Prox1P48437 Gm7809-201ENSMUST00000153199 742 ntBASIC11.31□□□□□ -0.6
Prox1P48437 Gm16379-201ENSMUST00000161469 348 ntBASIC11.31□□□□□ -0.6
Prox1P48437 Gm3890-201ENSMUST00000182416 207 ntBASIC11.31□□□□□ -0.6
Prox1P48437 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Gm8762-201ENSMUST00000193486 339 ntBASIC11.31□□□□□ -0.6
Prox1P48437 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.31□□□□□ -0.6
Prox1P48437 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.31□□□□□ -0.6
Prox1P48437 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.31□□□□□ -0.6
Prox1P48437 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.31□□□□□ -0.6
Prox1P48437 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.31□□□□□ -0.6
Prox1P48437 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.31□□□□□ -0.6
Prox1P48437 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.31□□□□□ -0.6
Prox1P48437 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.31□□□□□ -0.6
Prox1P48437 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Prox1P48437 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.31□□□□□ -0.6
Prox1P48437 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Prox1P48437 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Prox1P48437 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Prox1P48437 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Prox1P48437 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.3□□□□□ -0.6
Prox1P48437 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Prox1P48437 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.3□□□□□ -0.6
Prox1P48437 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Prox1P48437 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Prox1P48437 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Prox1P48437 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms