Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Cog3-203ENSMUST00000227473 4197 ntBASIC12.37□□□□□ -0.43
Rfx2P48379 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.37□□□□□ -0.43
Rfx2P48379 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rfx2P48379 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.37□□□□□ -0.43
Rfx2P48379 Gm11660-201ENSMUST00000120955 412 ntBASIC12.37□□□□□ -0.43
Rfx2P48379 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.37□□□□□ -0.43
Rfx2P48379 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.37□□□□□ -0.43
Rfx2P48379 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Gm5733-201ENSMUST00000190232 939 ntBASIC12.37□□□□□ -0.43
Rfx2P48379 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Rfx2P48379 Gm9555-201ENSMUST00000200908 583 ntBASIC12.37□□□□□ -0.43
Rfx2P48379 Gm29787-201ENSMUST00000222129 849 ntBASIC12.37□□□□□ -0.43
Rfx2P48379 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.37□□□□□ -0.43
Rfx2P48379 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rfx2P48379 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.37□□□□□ -0.43
Rfx2P48379 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rfx2P48379 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.37□□□□□ -0.43
Rfx2P48379 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Rfx2P48379 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rfx2P48379 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.37□□□□□ -0.43
Rfx2P48379 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.37□□□□□ -0.43
Rfx2P48379 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.37□□□□□ -0.43
Rfx2P48379 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Rfx2P48379 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.37□□□□□ -0.43
Rfx2P48379 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rfx2P48379 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rfx2P48379 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.36□□□□□ -0.43
Rfx2P48379 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rfx2P48379 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rfx2P48379 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Rfx2P48379 Gm15131-201ENSMUST00000119124 595 ntBASIC12.36□□□□□ -0.43
Rfx2P48379 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.36□□□□□ -0.43
Rfx2P48379 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.36□□□□□ -0.43
Rfx2P48379 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Rfx2P48379 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.36□□□□□ -0.43
Rfx2P48379 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.36□□□□□ -0.43
Rfx2P48379 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.36□□□□□ -0.43
Rfx2P48379 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.36□□□□□ -0.43
Rfx2P48379 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.36□□□□□ -0.43
Rfx2P48379 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.36□□□□□ -0.43
Rfx2P48379 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Rfx2P48379 Gm5705-201ENSMUST00000066241 711 ntBASIC12.36□□□□□ -0.43
Rfx2P48379 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Rfx2P48379 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Rfx2P48379 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rfx2P48379 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.36□□□□□ -0.43
Rfx2P48379 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.36□□□□□ -0.43
Rfx2P48379 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.35□□□□□ -0.43
Rfx2P48379 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Rfx2P48379 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.35□□□□□ -0.43
Rfx2P48379 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rfx2P48379 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms