Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.54□□□□□ -0.56
Sox18P43680 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sox18P43680 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Sox18P43680 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sox18P43680 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.54□□□□□ -0.56
Sox18P43680 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.54□□□□□ -0.56
Sox18P43680 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Sox18P43680 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.53□□□□□ -0.56
Sox18P43680 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Sox18P43680 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Sox18P43680 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Mir671-201ENSMUST00000102432 98 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.53□□□□□ -0.56
Sox18P43680 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.53□□□□□ -0.56
Sox18P43680 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Gm5909-201ENSMUST00000119768 1281 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Gm12783-201ENSMUST00000121425 397 ntBASIC11.53□□□□□ -0.56
Sox18P43680 4930448D08Rik-201ENSMUST00000149958 1247 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC11.53□□□□□ -0.56
Sox18P43680 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.53□□□□□ -0.56
Sox18P43680 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sox18P43680 Gm8531-201ENSMUST00000188319 893 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Gm3551-201ENSMUST00000190750 664 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Gm37005-201ENSMUST00000193281 1164 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Gm43761-201ENSMUST00000202132 991 ntBASIC11.53□□□□□ -0.56
Sox18P43680 9930120I10Rik-201ENSMUST00000203027 865 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Sox18P43680 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox18P43680 Gm17611-202ENSMUST00000220613 814 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox18P43680 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.53□□□□□ -0.56
Sox18P43680 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.53□□□□□ -0.56
Sox18P43680 AC154634.2-201ENSMUST00000225983 1184 ntBASIC11.53□□□□□ -0.56
Sox18P43680 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.53□□□□□ -0.56
Sox18P43680 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sox18P43680 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Sox18P43680 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Sox18P43680 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC11.53□□□□□ -0.56
Sox18P43680 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Sox18P43680 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Sox18P43680 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Sox18P43680 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox18P43680 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox18P43680 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox18P43680 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox18P43680 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox18P43680 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox18P43680 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox18P43680 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sox18P43680 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Sox18P43680 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox18P43680 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Sox18P43680 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Sox18P43680 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
Sox18P43680 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Sox18P43680 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms