Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Gm38246-201ENSMUST00000194318 1511 ntBASIC12.12□□□□□ -0.47
HttP42859 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.12□□□□□ -0.47
HttP42859 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
HttP42859 Gm13777-201ENSMUST00000118208 345 ntBASIC12.12□□□□□ -0.47
HttP42859 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Gm19246-201ENSMUST00000173599 255 ntBASIC12.12□□□□□ -0.47
HttP42859 Gm8828-201ENSMUST00000196786 1290 ntBASIC12.12□□□□□ -0.47
HttP42859 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.12□□□□□ -0.47
HttP42859 AC118639.1-202ENSMUST00000226957 653 ntBASIC12.12□□□□□ -0.47
HttP42859 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.12□□□□□ -0.47
HttP42859 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
HttP42859 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HttP42859 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
HttP42859 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.11□□□□□ -0.47
HttP42859 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Gm14524-201ENSMUST00000121066 683 ntBASIC12.11□□□□□ -0.47
HttP42859 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HttP42859 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC12.11□□□□□ -0.47
HttP42859 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.11□□□□□ -0.47
HttP42859 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.11□□□□□ -0.47
HttP42859 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HttP42859 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC12.11□□□□□ -0.47
HttP42859 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.11□□□□□ -0.47
HttP42859 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC12.11□□□□□ -0.47
HttP42859 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC12.11□□□□□ -0.47
HttP42859 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC12.11□□□□□ -0.47
HttP42859 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.11□□□□□ -0.47
HttP42859 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HttP42859 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
HttP42859 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC12.11□□□□□ -0.47
HttP42859 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.11□□□□□ -0.47
HttP42859 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 1700092E19Rik-202ENSMUST00000154703 1650 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HttP42859 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.11□□□□□ -0.47
HttP42859 Gm9630-201ENSMUST00000178304 885 ntBASIC12.11□□□□□ -0.47
HttP42859 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
HttP42859 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.11□□□□□ -0.47
HttP42859 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC12.11□□□□□ -0.47
HttP42859 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
HttP42859 Gm18504-201ENSMUST00000220917 929 ntBASIC12.11□□□□□ -0.47
HttP42859 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
HttP42859 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC12.11□□□□□ -0.47
HttP42859 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
HttP42859 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.1□□□□□ -0.47
HttP42859 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.1□□□□□ -0.47
HttP42859 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Gm11770-201ENSMUST00000135048 548 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Gm44420-201ENSMUST00000203669 490 ntBASIC12.1□□□□□ -0.47
HttP42859 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.1□□□□□ -0.47
HttP42859 Gm6378-201ENSMUST00000084199 444 ntBASIC12.1□□□□□ -0.47
HttP42859 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HttP42859 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms