Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
TfamP40630 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
TfamP40630 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TfamP40630 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.4□□□□□ -0.58
TfamP40630 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TfamP40630 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TfamP40630 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
TfamP40630 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TfamP40630 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TfamP40630 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TfamP40630 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TfamP40630 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TfamP40630 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
TfamP40630 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.4□□□□□ -0.59
TfamP40630 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TfamP40630 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.4□□□□□ -0.59
TfamP40630 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
TfamP40630 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
TfamP40630 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.4□□□□□ -0.59
TfamP40630 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.39□□□□□ -0.59
TfamP40630 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.39□□□□□ -0.59
TfamP40630 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
TfamP40630 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.39□□□□□ -0.59
TfamP40630 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
TfamP40630 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Gm14109-201ENSMUST00000118814 309 ntBASIC11.39□□□□□ -0.59
TfamP40630 Gm11700-201ENSMUST00000119409 403 ntBASIC11.39□□□□□ -0.59
TfamP40630 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.39□□□□□ -0.59
TfamP40630 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.39□□□□□ -0.59
TfamP40630 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC11.39□□□□□ -0.59
TfamP40630 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.39□□□□□ -0.59
TfamP40630 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.39□□□□□ -0.59
TfamP40630 Gm4607-201ENSMUST00000206649 577 ntBASIC11.39□□□□□ -0.59
TfamP40630 Gm21769-201ENSMUST00000211922 111 ntBASIC11.39□□□□□ -0.59
TfamP40630 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.39□□□□□ -0.59
TfamP40630 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
TfamP40630 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TfamP40630 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.39□□□□□ -0.59
TfamP40630 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TfamP40630 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.38□□□□□ -0.59
TfamP40630 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
TfamP40630 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.38□□□□□ -0.59
TfamP40630 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.38□□□□□ -0.59
TfamP40630 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.38□□□□□ -0.59
TfamP40630 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.38□□□□□ -0.59
TfamP40630 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.38□□□□□ -0.59
TfamP40630 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.38□□□□□ -0.59
TfamP40630 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
TfamP40630 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
TfamP40630 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms