Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd1P40201 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Chd1P40201 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Chd1P40201 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1P40201 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1P40201 Gm13777-201ENSMUST00000118208 345 ntBASIC17.27■□□□□ 0.35
Chd1P40201 Gm11700-201ENSMUST00000119409 403 ntBASIC17.27■□□□□ 0.35
Chd1P40201 Gm4917-201ENSMUST00000121452 650 ntBASIC17.27■□□□□ 0.35
Chd1P40201 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1P40201 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1P40201 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1P40201 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1P40201 Mir7088-201ENSMUST00000184227 86 ntBASIC17.27■□□□□ 0.35
Chd1P40201 Gm5424-201ENSMUST00000053865 1240 ntBASIC17.27■□□□□ 0.35
Chd1P40201 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC17.27■□□□□ 0.35
Chd1P40201 Gm23458-201ENSMUST00000083257 169 ntBASIC17.27■□□□□ 0.35
Chd1P40201 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd1P40201 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
Chd1P40201 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 AC122273.1-201ENSMUST00000213634 2327 ntBASIC17.26■□□□□ 0.35
Chd1P40201 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC17.26■□□□□ 0.35
Chd1P40201 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC17.26■□□□□ 0.35
Chd1P40201 Gm29164-201ENSMUST00000185454 1024 ntBASIC17.26■□□□□ 0.35
Chd1P40201 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Gm18862-201ENSMUST00000204643 933 ntBASIC17.26■□□□□ 0.35
Chd1P40201 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC17.26■□□□□ 0.35
Chd1P40201 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Gm22341-201ENSMUST00000083775 129 ntBASIC17.26■□□□□ 0.35
Chd1P40201 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd1P40201 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Gm33080-201ENSMUST00000205429 172 ntBASIC17.25■□□□□ 0.35
Chd1P40201 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC17.25■□□□□ 0.35
Chd1P40201 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC17.25■□□□□ 0.35
Chd1P40201 Grk6-205ENSMUST00000224653 2976 ntBASIC17.25■□□□□ 0.35
Chd1P40201 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Gm25514-201ENSMUST00000083860 135 ntBASIC17.25■□□□□ 0.35
Chd1P40201 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Gm5472-201ENSMUST00000178604 1678 ntBASIC17.25■□□□□ 0.35
Chd1P40201 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Chd1P40201 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC17.25■□□□□ 0.35
Chd1P40201 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd1P40201 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Ighv1-49-201ENSMUST00000103519 294 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chd1P40201 Gm14829-201ENSMUST00000121499 1138 ntBASIC17.24■□□□□ 0.35
Chd1P40201 Gm17107-201ENSMUST00000170983 553 ntBASIC17.24■□□□□ 0.35
Chd1P40201 Gm37597-201ENSMUST00000191853 382 ntBASIC17.24■□□□□ 0.35
Chd1P40201 Gm37009-201ENSMUST00000193297 361 ntBASIC17.24■□□□□ 0.35
Chd1P40201 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC17.24■□□□□ 0.35
Chd1P40201 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC17.24■□□□□ 0.35
Chd1P40201 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC17.24■□□□□ 0.35
Chd1P40201 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Chd1P40201 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chd1P40201 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC17.24■□□□□ 0.35
Chd1P40201 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC17.24■□□□□ 0.35
Chd1P40201 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chd1P40201 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC17.24■□□□□ 0.35
Chd1P40201 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chd1P40201 Gm3635-201ENSMUST00000212314 354 ntBASIC17.24■□□□□ 0.35
Chd1P40201 AC154585.1-201ENSMUST00000218917 997 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms