Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.89□□□□□ -0.67
Sftpa1P35242 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sftpa1P35242 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sftpa1P35242 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.88□□□□□ -0.67
Sftpa1P35242 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Sftpa1P35242 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sftpa1P35242 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.88□□□□□ -0.67
Sftpa1P35242 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Sftpa1P35242 Gm12218-201ENSMUST00000117666 399 ntBASIC10.88□□□□□ -0.67
Sftpa1P35242 Gm12943-201ENSMUST00000119616 210 ntBASIC10.88□□□□□ -0.67
Sftpa1P35242 Gm11244-201ENSMUST00000121243 237 ntBASIC10.88□□□□□ -0.67
Sftpa1P35242 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.88□□□□□ -0.67
Sftpa1P35242 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Sftpa1P35242 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.88□□□□□ -0.67
Sftpa1P35242 AC241621.2-201ENSMUST00000223991 2151 ntBASIC10.88□□□□□ -0.67
Sftpa1P35242 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Gm8894-201ENSMUST00000074642 666 ntBASIC10.88□□□□□ -0.67
Sftpa1P35242 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
Sftpa1P35242 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sftpa1P35242 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sftpa1P35242 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.88□□□□□ -0.67
Sftpa1P35242 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.88□□□□□ -0.67
Sftpa1P35242 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sftpa1P35242 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Mir671-201ENSMUST00000102432 98 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sftpa1P35242 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm14274-201ENSMUST00000117182 615 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm11619-201ENSMUST00000117474 237 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm14270-201ENSMUST00000118388 846 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm15003-201ENSMUST00000118884 446 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm14213-201ENSMUST00000119778 768 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sftpa1P35242 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sftpa1P35242 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm7504-201ENSMUST00000201449 424 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm30671-201ENSMUST00000214898 318 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.87□□□□□ -0.67
Sftpa1P35242 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sftpa1P35242 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sftpa1P35242 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sftpa1P35242 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sftpa1P35242 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sftpa1P35242 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sftpa1P35242 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.87□□□□□ -0.67
Sftpa1P35242 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.87□□□□□ -0.67
Sftpa1P35242 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Sftpa1P35242 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sftpa1P35242 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Sftpa1P35242 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Sftpa1P35242 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms