Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.48□□□□□ -0.25
Vcam1P29533 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 Gm25063-201ENSMUST00000104666 94 ntBASIC13.48□□□□□ -0.25
Vcam1P29533 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
Vcam1P29533 Gm14892-201ENSMUST00000117636 267 ntBASIC13.48□□□□□ -0.25
Vcam1P29533 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.48□□□□□ -0.25
Vcam1P29533 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.48□□□□□ -0.25
Vcam1P29533 Gm43163-201ENSMUST00000196571 442 ntBASIC13.48□□□□□ -0.25
Vcam1P29533 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.48□□□□□ -0.25
Vcam1P29533 Gm5468-202ENSMUST00000227851 682 ntBASIC13.48□□□□□ -0.25
Vcam1P29533 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Vcam1P29533 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Vcam1P29533 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Vcam1P29533 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.47□□□□□ -0.25
Vcam1P29533 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vcam1P29533 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vcam1P29533 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vcam1P29533 Gm12990-201ENSMUST00000120372 468 ntBASIC13.47□□□□□ -0.25
Vcam1P29533 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Gm12030-201ENSMUST00000121917 223 ntBASIC13.47□□□□□ -0.25
Vcam1P29533 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC13.47□□□□□ -0.25
Vcam1P29533 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.47□□□□□ -0.25
Vcam1P29533 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.47□□□□□ -0.25
Vcam1P29533 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Vcam1P29533 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC13.47□□□□□ -0.25
Vcam1P29533 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC13.47□□□□□ -0.25
Vcam1P29533 Gm8197-202ENSMUST00000193422 934 ntBASIC13.47□□□□□ -0.25
Vcam1P29533 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC13.47□□□□□ -0.25
Vcam1P29533 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Vcam1P29533 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC13.47□□□□□ -0.25
Vcam1P29533 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.47□□□□□ -0.25
Vcam1P29533 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC13.47□□□□□ -0.25
Vcam1P29533 CT030170.2-201ENSMUST00000223267 126 ntBASIC13.47□□□□□ -0.25
Vcam1P29533 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vcam1P29533 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Vcam1P29533 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Vcam1P29533 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Vcam1P29533 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.47□□□□□ -0.25
Vcam1P29533 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Vcam1P29533 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Vcam1P29533 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Vcam1P29533 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Vcam1P29533 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Vcam1P29533 Gm21778-201ENSMUST00000178779 471 ntBASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms