Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm43916-201ENSMUST00000205062 967 ntBASIC9.82□□□□□ -0.84
Col8a2P25318 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.82□□□□□ -0.84
Col8a2P25318 Gm10109-202ENSMUST00000206890 1211 ntBASIC9.82□□□□□ -0.84
Col8a2P25318 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.82□□□□□ -0.84
Col8a2P25318 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Col8a2P25318 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Gm42829-201ENSMUST00000198417 2585 ntBASIC9.82□□□□□ -0.84
Col8a2P25318 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Col8a2P25318 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC9.82□□□□□ -0.84
Col8a2P25318 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Col8a2P25318 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Col8a2P25318 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.82□□□□□ -0.84
Col8a2P25318 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Col8a2P25318 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Col8a2P25318 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Col8a2P25318 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC9.81□□□□□ -0.84
Col8a2P25318 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
Col8a2P25318 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Gm14150-201ENSMUST00000122404 1354 ntBASIC9.81□□□□□ -0.84
Col8a2P25318 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Gm13916-201ENSMUST00000117368 628 ntBASIC9.81□□□□□ -0.84
Col8a2P25318 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC9.81□□□□□ -0.84
Col8a2P25318 Gm15725-201ENSMUST00000119947 1090 ntBASIC9.81□□□□□ -0.84
Col8a2P25318 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.81□□□□□ -0.84
Col8a2P25318 Gm23085-201ENSMUST00000157849 293 ntBASIC9.81□□□□□ -0.84
Col8a2P25318 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC9.81□□□□□ -0.84
Col8a2P25318 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.81□□□□□ -0.84
Col8a2P25318 Gm28937-201ENSMUST00000185413 695 ntBASIC9.81□□□□□ -0.84
Col8a2P25318 Gm29400-201ENSMUST00000187208 695 ntBASIC9.81□□□□□ -0.84
Col8a2P25318 Gm28662-201ENSMUST00000188446 695 ntBASIC9.81□□□□□ -0.84
Col8a2P25318 Gm28251-201ENSMUST00000188835 695 ntBASIC9.81□□□□□ -0.84
Col8a2P25318 Gm37318-201ENSMUST00000194325 695 ntBASIC9.81□□□□□ -0.84
Col8a2P25318 Gm38017-201ENSMUST00000194768 695 ntBASIC9.81□□□□□ -0.84
Col8a2P25318 Gm37287-201ENSMUST00000195449 695 ntBASIC9.81□□□□□ -0.84
Col8a2P25318 Gm37793-201ENSMUST00000195548 695 ntBASIC9.81□□□□□ -0.84
Col8a2P25318 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC9.81□□□□□ -0.84
Col8a2P25318 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.81□□□□□ -0.84
Col8a2P25318 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Col8a2P25318 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Col8a2P25318 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Col8a2P25318 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Col8a2P25318 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Col8a2P25318 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Col8a2P25318 AC166836.1-201ENSMUST00000219933 1795 ntBASIC9.8□□□□□ -0.84
Col8a2P25318 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Col8a2P25318 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms