Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.1□□□□□ -0.63
Clk1P22518 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.1□□□□□ -0.63
Clk1P22518 Gm9271-201ENSMUST00000185988 2580 ntBASIC11.1□□□□□ -0.63
Clk1P22518 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Clk1P22518 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Gm42826-201ENSMUST00000197548 2639 ntBASIC11.09□□□□□ -0.63
Clk1P22518 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Cd8a-202ENSMUST00000172321 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.09□□□□□ -0.63
Clk1P22518 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.09□□□□□ -0.63
Clk1P22518 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.09□□□□□ -0.63
Clk1P22518 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.09□□□□□ -0.63
Clk1P22518 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Clk1P22518 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.09□□□□□ -0.63
Clk1P22518 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Gm45331-201ENSMUST00000209868 554 ntBASIC11.09□□□□□ -0.63
Clk1P22518 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.09□□□□□ -0.63
Clk1P22518 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.09□□□□□ -0.63
Clk1P22518 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Gm8712-201ENSMUST00000221090 701 ntBASIC11.09□□□□□ -0.63
Clk1P22518 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC11.09□□□□□ -0.63
Clk1P22518 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Clk1P22518 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.09□□□□□ -0.63
Clk1P22518 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.63
Clk1P22518 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Clk1P22518 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.08□□□□□ -0.64
Clk1P22518 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Clk1P22518 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Gm24255-201ENSMUST00000104481 128 ntBASIC11.08□□□□□ -0.64
Clk1P22518 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Clk1P22518 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Clk1P22518 Gm15198-201ENSMUST00000117283 177 ntBASIC11.08□□□□□ -0.64
Clk1P22518 Gm14109-201ENSMUST00000118814 309 ntBASIC11.08□□□□□ -0.64
Clk1P22518 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.08□□□□□ -0.64
Clk1P22518 Gm14381-201ENSMUST00000122105 414 ntBASIC11.08□□□□□ -0.64
Clk1P22518 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.08□□□□□ -0.64
Clk1P22518 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Clk1P22518 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Clk1P22518 Gm27516-201ENSMUST00000184237 98 ntBASIC11.08□□□□□ -0.64
Clk1P22518 Gm8885-201ENSMUST00000189382 598 ntBASIC11.08□□□□□ -0.64
Clk1P22518 Gm38341-201ENSMUST00000195357 515 ntBASIC11.08□□□□□ -0.64
Clk1P22518 Gm19187-201ENSMUST00000206781 892 ntBASIC11.08□□□□□ -0.64
Clk1P22518 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.08□□□□□ -0.64
Clk1P22518 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.08□□□□□ -0.64
Clk1P22518 Gm19994-201ENSMUST00000217086 586 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms