Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.34□□□□□ -0.59
BdnfP21237 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.34□□□□□ -0.59
BdnfP21237 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
BdnfP21237 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
BdnfP21237 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
BdnfP21237 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
BdnfP21237 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
BdnfP21237 Sfxn2-201ENSMUST00000026011 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
BdnfP21237 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
BdnfP21237 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.33□□□□□ -0.6
BdnfP21237 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 9430065F17Rik-203ENSMUST00000223845 1380 ntBASIC11.33□□□□□ -0.6
BdnfP21237 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
BdnfP21237 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Gm11531-201ENSMUST00000117614 555 ntBASIC11.33□□□□□ -0.6
BdnfP21237 Gm12957-201ENSMUST00000117835 377 ntBASIC11.33□□□□□ -0.6
BdnfP21237 Gm8062-201ENSMUST00000139696 444 ntBASIC11.33□□□□□ -0.6
BdnfP21237 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.33□□□□□ -0.6
BdnfP21237 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.33□□□□□ -0.6
BdnfP21237 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.33□□□□□ -0.6
BdnfP21237 Gm27572-201ENSMUST00000183702 255 ntBASIC11.33□□□□□ -0.6
BdnfP21237 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.33□□□□□ -0.6
BdnfP21237 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.33□□□□□ -0.6
BdnfP21237 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.33□□□□□ -0.6
BdnfP21237 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.33□□□□□ -0.6
BdnfP21237 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
BdnfP21237 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.33□□□□□ -0.6
BdnfP21237 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.33□□□□□ -0.6
BdnfP21237 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
BdnfP21237 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
BdnfP21237 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
BdnfP21237 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.33□□□□□ -0.6
BdnfP21237 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.33□□□□□ -0.6
BdnfP21237 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
BdnfP21237 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.32□□□□□ -0.6
BdnfP21237 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.32□□□□□ -0.6
BdnfP21237 Prr30-201ENSMUST00000057718 1862 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
BdnfP21237 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
BdnfP21237 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
BdnfP21237 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.32□□□□□ -0.6
BdnfP21237 Gm25214-201ENSMUST00000104573 129 ntBASIC11.32□□□□□ -0.6
BdnfP21237 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Gm11793-201ENSMUST00000120433 981 ntBASIC11.32□□□□□ -0.6
BdnfP21237 Gm14832-201ENSMUST00000121289 322 ntBASIC11.32□□□□□ -0.6
BdnfP21237 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.32□□□□□ -0.6
BdnfP21237 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Gm43118-201ENSMUST00000199149 775 ntBASIC11.32□□□□□ -0.6
BdnfP21237 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Gm18062-201ENSMUST00000208020 547 ntBASIC11.32□□□□□ -0.6
BdnfP21237 Gm18055-201ENSMUST00000208254 547 ntBASIC11.32□□□□□ -0.6
BdnfP21237 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.32□□□□□ -0.6
BdnfP21237 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.32□□□□□ -0.6
BdnfP21237 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
BdnfP21237 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
BdnfP21237 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
BdnfP21237 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.32□□□□□ -0.6
BdnfP21237 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
BdnfP21237 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms