Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Hoxc9P09633 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc9P09633 Gm12194-201ENSMUST00000117756 1012 ntBASIC15.17■□□□□ 0.02
Hoxc9P09633 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc9P09633 Gm17192-201ENSMUST00000169031 511 ntBASIC15.17■□□□□ 0.02
Hoxc9P09633 Ighv2-1-201ENSMUST00000170946 353 ntBASIC15.17■□□□□ 0.02
Hoxc9P09633 AC238811.4-201ENSMUST00000178019 1246 ntBASIC15.17■□□□□ 0.02
Hoxc9P09633 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC15.17■□□□□ 0.02
Hoxc9P09633 AC238940.3-201ENSMUST00000178830 1246 ntBASIC15.17■□□□□ 0.02
Hoxc9P09633 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
Hoxc9P09633 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc9P09633 Gm4604-201ENSMUST00000025040 390 ntBASIC15.17■□□□□ 0.02
Hoxc9P09633 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Hoxc9P09633 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Hoxc9P09633 Gm43334-201ENSMUST00000197740 1318 ntBASIC15.17■□□□□ 0.02
Hoxc9P09633 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm25053-201ENSMUST00000103982 133 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm25922-201ENSMUST00000104281 130 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm8111-201ENSMUST00000117659 987 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm12816-201ENSMUST00000118069 1212 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm24679-201ENSMUST00000158762 111 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm4895-201ENSMUST00000181646 1137 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm9081-201ENSMUST00000182346 991 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC15.16■□□□□ 0.02
Hoxc9P09633 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm25053-202ENSMUST00000199731 132 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 AC168279.1-201ENSMUST00000214611 382 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 AC156501.1-201ENSMUST00000228219 270 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hoxc9P09633 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC15.16■□□□□ 0.02
Hoxc9P09633 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm44056-201ENSMUST00000204623 1427 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Hoxc9P09633 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm20554-201ENSMUST00000177421 2352 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.16■□□□□ 0.02
Hoxc9P09633 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hoxc9P09633 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC15.15■□□□□ 0.02
Hoxc9P09633 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC15.15■□□□□ 0.02
Hoxc9P09633 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hoxc9P09633 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Hoxc9P09633 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC15.15■□□□□ 0.02
Hoxc9P09633 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Gm12179-201ENSMUST00000118344 1272 ntBASIC15.15■□□□□ 0.02
Hoxc9P09633 Gm12783-201ENSMUST00000121425 397 ntBASIC15.15■□□□□ 0.02
Hoxc9P09633 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC15.15■□□□□ 0.02
Hoxc9P09633 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC15.15■□□□□ 0.02
Hoxc9P09633 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC15.15■□□□□ 0.02
Hoxc9P09633 Gm43912-201ENSMUST00000204352 538 ntBASIC15.15■□□□□ 0.02
Hoxc9P09633 Gm6722-201ENSMUST00000221586 390 ntBASIC15.15■□□□□ 0.02
Hoxc9P09633 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hoxc9P09633 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Hoxc9P09633 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hoxc9P09633 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hoxc9P09633 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms