Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.95□□□□□ -0.5
Hoxb3P09026 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.95□□□□□ -0.5
Hoxb3P09026 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Hoxb3P09026 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC11.94□□□□□ -0.5
Hoxb3P09026 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm24590-201ENSMUST00000116699 119 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm24954-201ENSMUST00000178831 110 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm29410-201ENSMUST00000188383 694 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm18717-201ENSMUST00000192744 1241 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm18711-201ENSMUST00000199341 750 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm34701-201ENSMUST00000204213 849 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm44814-201ENSMUST00000207018 434 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.94□□□□□ -0.5
Hoxb3P09026 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.94□□□□□ -0.5
Hoxb3P09026 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Hoxb3P09026 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hoxb3P09026 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.94□□□□□ -0.5
Hoxb3P09026 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hoxb3P09026 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm45114-201ENSMUST00000208280 1349 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm11509-201ENSMUST00000117358 325 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hoxb3P09026 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm13487-201ENSMUST00000122240 864 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm6485-201ENSMUST00000160676 439 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.93□□□□□ -0.5
Hoxb3P09026 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC11.93□□□□□ -0.5
Hoxb3P09026 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.93□□□□□ -0.5
Hoxb3P09026 Gm20854-202ENSMUST00000181549 1156 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms