Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 Gm10076-201ENSMUST00000073238 384 ntBASIC11.1□□□□□ -0.63
Krt1P04104 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Krt1P04104 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.1□□□□□ -0.63
Krt1P04104 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.1□□□□□ -0.63
Krt1P04104 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Krt1P04104 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Krt1P04104 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.1□□□□□ -0.63
Krt1P04104 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Krt1P04104 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Krt1P04104 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Syt7-204ENSMUST00000223586 1344 ntBASIC11.09□□□□□ -0.63
Krt1P04104 Fhdc1-201ENSMUST00000091002 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Krt1P04104 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.09□□□□□ -0.63
Krt1P04104 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.09□□□□□ -0.63
Krt1P04104 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
Krt1P04104 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.09□□□□□ -0.63
Krt1P04104 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Krt1P04104 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.09□□□□□ -0.63
Krt1P04104 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Krt1P04104 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Krt1P04104 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Gm14441-201ENSMUST00000121960 540 ntBASIC11.09□□□□□ -0.63
Krt1P04104 Proscos-202ENSMUST00000178990 666 ntBASIC11.09□□□□□ -0.63
Krt1P04104 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Krt1P04104 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.09□□□□□ -0.63
Krt1P04104 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.09□□□□□ -0.63
Krt1P04104 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.09□□□□□ -0.63
Krt1P04104 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.09□□□□□ -0.63
Krt1P04104 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.09□□□□□ -0.63
Krt1P04104 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.09□□□□□ -0.63
Krt1P04104 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.09□□□□□ -0.63
Krt1P04104 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Krt1P04104 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.09□□□□□ -0.63
Krt1P04104 Gm45925-201ENSMUST00000218882 744 ntBASIC11.09□□□□□ -0.63
Krt1P04104 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.09□□□□□ -0.63
Krt1P04104 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Krt1P04104 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Krt1P04104 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.09□□□□□ -0.63
Krt1P04104 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Krt1P04104 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.09□□□□□ -0.63
Krt1P04104 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.08□□□□□ -0.64
Krt1P04104 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Krt1P04104 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Krt1P04104 Gm12363-201ENSMUST00000122250 668 ntBASIC11.08□□□□□ -0.64
Krt1P04104 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.08□□□□□ -0.64
Krt1P04104 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.08□□□□□ -0.64
Krt1P04104 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
Krt1P04104 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.08□□□□□ -0.64
Krt1P04104 Gm2495-201ENSMUST00000191160 466 ntBASIC11.08□□□□□ -0.64
Krt1P04104 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.08□□□□□ -0.64
Krt1P04104 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.08□□□□□ -0.64
Krt1P04104 Gm8598-201ENSMUST00000221184 836 ntBASIC11.08□□□□□ -0.64
Krt1P04104 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.08□□□□□ -0.64
Krt1P04104 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Krt1P04104 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms