Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm7851-201ENSMUST00000117574 323 ntBASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm11511-201ENSMUST00000118146 540 ntBASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm13611-201ENSMUST00000118269 318 ntBASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm12501-201ENSMUST00000119163 529 ntBASIC9.91□□□□□ -0.82
Hoxa3P02831 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Mir1943-201ENSMUST00000158276 73 ntBASIC9.91□□□□□ -0.82
Hoxa3P02831 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm8343-201ENSMUST00000182705 994 ntBASIC9.91□□□□□ -0.82
Hoxa3P02831 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm43184-201ENSMUST00000197247 542 ntBASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm807-202ENSMUST00000224929 408 ntBASIC9.91□□□□□ -0.82
Hoxa3P02831 AC154276.3-201ENSMUST00000227643 998 ntBASIC9.91□□□□□ -0.82
Hoxa3P02831 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm5780-201ENSMUST00000217774 1834 ntBASIC9.91□□□□□ -0.82
Hoxa3P02831 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxa3P02831 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Gm6580-201ENSMUST00000117504 1357 ntBASIC9.9□□□□□ -0.82
Hoxa3P02831 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Hoxa3P02831 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Hoxa3P02831 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.9□□□□□ -0.82
Hoxa3P02831 Gm12165-201ENSMUST00000117047 342 ntBASIC9.9□□□□□ -0.82
Hoxa3P02831 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.9□□□□□ -0.82
Hoxa3P02831 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.9□□□□□ -0.82
Hoxa3P02831 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.9□□□□□ -0.82
Hoxa3P02831 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.9□□□□□ -0.82
Hoxa3P02831 Gm9211-201ENSMUST00000182882 975 ntBASIC9.9□□□□□ -0.82
Hoxa3P02831 Gm37246-201ENSMUST00000192665 835 ntBASIC9.9□□□□□ -0.82
Hoxa3P02831 Gm4482-201ENSMUST00000200876 742 ntBASIC9.9□□□□□ -0.82
Hoxa3P02831 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Gm4157-201ENSMUST00000211647 679 ntBASIC9.9□□□□□ -0.82
Hoxa3P02831 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC9.9□□□□□ -0.82
Hoxa3P02831 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.9□□□□□ -0.82
Hoxa3P02831 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Ntng1-201ENSMUST00000051253 327 ntBASIC9.9□□□□□ -0.82
Hoxa3P02831 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC9.9□□□□□ -0.82
Hoxa3P02831 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Hoxa3P02831 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Hoxa3P02831 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
Hoxa3P02831 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Hoxa3P02831 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Hoxa3P02831 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hoxa3P02831 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.83
Hoxa3P02831 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hoxa3P02831 Gm42463-201ENSMUST00000198041 4886 ntBASIC9.9□□□□□ -0.83
Hoxa3P02831 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hoxa3P02831 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Hoxa3P02831 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hoxa3P02831 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC9.9□□□□□ -0.83
Hoxa3P02831 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hoxa3P02831 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hoxa3P02831 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Hoxa3P02831 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Hoxa3P02831 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms