Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
P01852 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.8□□□□□ -0.68
P01852 Gm23596-201ENSMUST00000104304 132 ntBASIC10.8□□□□□ -0.68
P01852 Gm23200-201ENSMUST00000104379 132 ntBASIC10.8□□□□□ -0.68
P01852 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
P01852 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.8□□□□□ -0.68
P01852 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.8□□□□□ -0.68
P01852 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Gm19287-201ENSMUST00000203190 358 ntBASIC10.8□□□□□ -0.68
P01852 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
P01852 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.8□□□□□ -0.68
P01852 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
P01852 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.8□□□□□ -0.68
P01852 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
P01852 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
P01852 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.8□□□□□ -0.68
P01852 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
P01852 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
P01852 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
P01852 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.79□□□□□ -0.68
P01852 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.79□□□□□ -0.68
P01852 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.79□□□□□ -0.68
P01852 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC10.79□□□□□ -0.68
P01852 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.79□□□□□ -0.68
P01852 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.79□□□□□ -0.68
P01852 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
P01852 Gm27552-201ENSMUST00000183351 62 ntBASIC10.79□□□□□ -0.68
P01852 Gm27844-201ENSMUST00000183613 62 ntBASIC10.79□□□□□ -0.68
P01852 AU022133-201ENSMUST00000200601 873 ntBASIC10.79□□□□□ -0.68
P01852 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
P01852 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.79□□□□□ -0.68
P01852 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.79□□□□□ -0.68
P01852 Gm807-202ENSMUST00000224929 408 ntBASIC10.79□□□□□ -0.68
P01852 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.79□□□□□ -0.68
P01852 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
P01852 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.79□□□□□ -0.68
P01852 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
P01852 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P01852 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.78□□□□□ -0.68
P01852 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.78□□□□□ -0.68
P01852 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.78□□□□□ -0.68
P01852 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.78□□□□□ -0.68
P01852 Gm12196-201ENSMUST00000120954 262 ntBASIC10.78□□□□□ -0.68
P01852 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Gm18734-201ENSMUST00000172937 808 ntBASIC10.78□□□□□ -0.68
P01852 Gm25732-201ENSMUST00000175168 60 ntBASIC10.78□□□□□ -0.68
P01852 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01852 Gm3332-201ENSMUST00000189337 928 ntBASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms