Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CopeO89079 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
CopeO89079 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CopeO89079 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.11□□□□□ -0.47
CopeO89079 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CopeO89079 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.11□□□□□ -0.47
CopeO89079 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Mospd4-201ENSMUST00000180618 576 ntBASIC12.11□□□□□ -0.47
CopeO89079 Gm38314-201ENSMUST00000195709 625 ntBASIC12.11□□□□□ -0.47
CopeO89079 Gm43118-201ENSMUST00000199149 775 ntBASIC12.11□□□□□ -0.47
CopeO89079 Gm5950-201ENSMUST00000213337 772 ntBASIC12.11□□□□□ -0.47
CopeO89079 Gm807-202ENSMUST00000224929 408 ntBASIC12.11□□□□□ -0.47
CopeO89079 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.11□□□□□ -0.47
CopeO89079 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CopeO89079 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.11□□□□□ -0.47
CopeO89079 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CopeO89079 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CopeO89079 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CopeO89079 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CopeO89079 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.11□□□□□ -0.47
CopeO89079 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CopeO89079 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CopeO89079 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
CopeO89079 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.1□□□□□ -0.47
CopeO89079 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.1□□□□□ -0.47
CopeO89079 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.1□□□□□ -0.47
CopeO89079 AC123857.2-201ENSMUST00000225756 1582 ntBASIC12.1□□□□□ -0.47
CopeO89079 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CopeO89079 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Gm13226-201ENSMUST00000117838 404 ntBASIC12.1□□□□□ -0.47
CopeO89079 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CopeO89079 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.1□□□□□ -0.47
CopeO89079 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.1□□□□□ -0.47
CopeO89079 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.1□□□□□ -0.47
CopeO89079 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CopeO89079 Gm9192-201ENSMUST00000183221 985 ntBASIC12.1□□□□□ -0.47
CopeO89079 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.1□□□□□ -0.47
CopeO89079 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CopeO89079 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
CopeO89079 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CopeO89079 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CopeO89079 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CopeO89079 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CopeO89079 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.09□□□□□ -0.47
CopeO89079 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CopeO89079 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms