Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Cops4O88544 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Gm3890-201ENSMUST00000182416 207 ntBASIC10.86□□□□□ -0.67
Cops4O88544 Gm27731-201ENSMUST00000185192 107 ntBASIC10.86□□□□□ -0.67
Cops4O88544 Gm45930-201ENSMUST00000221330 292 ntBASIC10.86□□□□□ -0.67
Cops4O88544 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.86□□□□□ -0.67
Cops4O88544 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.86□□□□□ -0.67
Cops4O88544 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.86□□□□□ -0.67
Cops4O88544 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.86□□□□□ -0.67
Cops4O88544 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.86□□□□□ -0.67
Cops4O88544 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Cops4O88544 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Cops4O88544 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Cops4O88544 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.85□□□□□ -0.67
Cops4O88544 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.85□□□□□ -0.67
Cops4O88544 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.85□□□□□ -0.67
Cops4O88544 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.85□□□□□ -0.67
Cops4O88544 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cops4O88544 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Cops4O88544 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.85□□□□□ -0.67
Cops4O88544 Gm6222-202ENSMUST00000182143 629 ntBASIC10.85□□□□□ -0.67
Cops4O88544 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.85□□□□□ -0.67
Cops4O88544 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC10.85□□□□□ -0.67
Cops4O88544 Gm10076-201ENSMUST00000073238 384 ntBASIC10.85□□□□□ -0.67
Cops4O88544 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Cops4O88544 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Gm43937-201ENSMUST00000204640 3122 ntBASIC10.85□□□□□ -0.67
Cops4O88544 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cops4O88544 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cops4O88544 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Cops4O88544 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.85□□□□□ -0.67
Cops4O88544 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Cops4O88544 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Cops4O88544 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cops4O88544 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.84□□□□□ -0.67
Cops4O88544 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.84□□□□□ -0.67
Cops4O88544 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Cops4O88544 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cops4O88544 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.84□□□□□ -0.67
Cops4O88544 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cops4O88544 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cops4O88544 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.84□□□□□ -0.67
Cops4O88544 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC10.84□□□□□ -0.67
Cops4O88544 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cops4O88544 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cops4O88544 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cops4O88544 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Cops4O88544 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Cops4O88544 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cops4O88544 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.84□□□□□ -0.67
Cops4O88544 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.84□□□□□ -0.67
Cops4O88544 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Cops4O88544 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Cops4O88544 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Cops4O88544 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms