Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
Chrna4O70174 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Chrna4O70174 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Chrna4O70174 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.86□□□□□ -0.51
Chrna4O70174 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.86□□□□□ -0.51
Chrna4O70174 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chrna4O70174 Gm12857-201ENSMUST00000117678 592 ntBASIC11.86□□□□□ -0.51
Chrna4O70174 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Chrna4O70174 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Chrna4O70174 Gm27341-201ENSMUST00000183570 106 ntBASIC11.86□□□□□ -0.51
Chrna4O70174 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.86□□□□□ -0.51
Chrna4O70174 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Chrna4O70174 AC113082.1-201ENSMUST00000217324 327 ntBASIC11.86□□□□□ -0.51
Chrna4O70174 Gm18730-201ENSMUST00000218038 343 ntBASIC11.86□□□□□ -0.51
Chrna4O70174 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chrna4O70174 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Chrna4O70174 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.86□□□□□ -0.51
Chrna4O70174 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.86□□□□□ -0.51
Chrna4O70174 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chrna4O70174 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.85□□□□□ -0.51
Chrna4O70174 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.85□□□□□ -0.51
Chrna4O70174 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chrna4O70174 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.85□□□□□ -0.51
Chrna4O70174 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chrna4O70174 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.85□□□□□ -0.51
Chrna4O70174 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Gm11439-201ENSMUST00000118598 409 ntBASIC11.85□□□□□ -0.51
Chrna4O70174 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Chrna4O70174 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.85□□□□□ -0.51
Chrna4O70174 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Chrna4O70174 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Chrna4O70174 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Chrna4O70174 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.85□□□□□ -0.51
Chrna4O70174 Gm18056-201ENSMUST00000207670 568 ntBASIC11.85□□□□□ -0.51
Chrna4O70174 Gm18061-201ENSMUST00000208350 562 ntBASIC11.85□□□□□ -0.51
Chrna4O70174 Gm18063-201ENSMUST00000208529 568 ntBASIC11.85□□□□□ -0.51
Chrna4O70174 Gm18052-201ENSMUST00000208750 559 ntBASIC11.85□□□□□ -0.51
Chrna4O70174 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.85□□□□□ -0.51
Chrna4O70174 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.85□□□□□ -0.51
Chrna4O70174 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.85□□□□□ -0.51
Chrna4O70174 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chrna4O70174 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Chrna4O70174 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.85□□□□□ -0.51
Chrna4O70174 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.85□□□□□ -0.51
Chrna4O70174 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.85□□□□□ -0.51
Chrna4O70174 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Chrna4O70174 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chrna4O70174 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chrna4O70174 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chrna4O70174 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chrna4O70174 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chrna4O70174 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chrna4O70174 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chrna4O70174 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chrna4O70174 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chrna4O70174 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chrna4O70174 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chrna4O70174 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chrna4O70174 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chrna4O70174 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chrna4O70174 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms