Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.96□□□□□ -0.66
BckdkO55028 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
BckdkO55028 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.96□□□□□ -0.66
BckdkO55028 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
BckdkO55028 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
BckdkO55028 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
BckdkO55028 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
BckdkO55028 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
BckdkO55028 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
BckdkO55028 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
BckdkO55028 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.96□□□□□ -0.66
BckdkO55028 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
BckdkO55028 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
BckdkO55028 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
BckdkO55028 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.95□□□□□ -0.66
BckdkO55028 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
BckdkO55028 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.95□□□□□ -0.66
BckdkO55028 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC10.95□□□□□ -0.66
BckdkO55028 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC10.95□□□□□ -0.66
BckdkO55028 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Gm12201-201ENSMUST00000120657 1234 ntBASIC10.95□□□□□ -0.66
BckdkO55028 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC10.95□□□□□ -0.66
BckdkO55028 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.95□□□□□ -0.66
BckdkO55028 Gm37666-201ENSMUST00000194110 866 ntBASIC10.95□□□□□ -0.66
BckdkO55028 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.95□□□□□ -0.66
BckdkO55028 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.95□□□□□ -0.66
BckdkO55028 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.95□□□□□ -0.66
BckdkO55028 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.95□□□□□ -0.66
BckdkO55028 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.95□□□□□ -0.66
BckdkO55028 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.95□□□□□ -0.66
BckdkO55028 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.95□□□□□ -0.66
BckdkO55028 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
BckdkO55028 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.95□□□□□ -0.66
BckdkO55028 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC10.95□□□□□ -0.66
BckdkO55028 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
BckdkO55028 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
BckdkO55028 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.94□□□□□ -0.66
BckdkO55028 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
BckdkO55028 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.94□□□□□ -0.66
BckdkO55028 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.94□□□□□ -0.66
BckdkO55028 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.94□□□□□ -0.66
BckdkO55028 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.94□□□□□ -0.66
BckdkO55028 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Gm5616-201ENSMUST00000165252 384 ntBASIC10.94□□□□□ -0.66
BckdkO55028 Gm8741-201ENSMUST00000174736 384 ntBASIC10.94□□□□□ -0.66
BckdkO55028 Gm27552-201ENSMUST00000183351 62 ntBASIC10.94□□□□□ -0.66
BckdkO55028 Gm27844-201ENSMUST00000183613 62 ntBASIC10.94□□□□□ -0.66
BckdkO55028 Gm7003-201ENSMUST00000195089 312 ntBASIC10.94□□□□□ -0.66
BckdkO55028 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC10.94□□□□□ -0.66
BckdkO55028 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
BckdkO55028 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
BckdkO55028 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
BckdkO55028 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.94□□□□□ -0.66
BckdkO55028 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
BckdkO55028 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
BckdkO55028 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms