Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Shisa8J3QNX5 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Gm11700-201ENSMUST00000119409 403 ntBASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Gm4986-201ENSMUST00000119731 549 ntBASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Gm15610-201ENSMUST00000120584 195 ntBASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Gm7722-201ENSMUST00000120646 741 ntBASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Gm28882-201ENSMUST00000185504 314 ntBASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.71□□□□□ -0.69
Shisa8J3QNX5 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Shisa8J3QNX5 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shisa8J3QNX5 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shisa8J3QNX5 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Shisa8J3QNX5 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shisa8J3QNX5 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Shisa8J3QNX5 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Shisa8J3QNX5 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Shisa8J3QNX5 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shisa8J3QNX5 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Shisa8J3QNX5 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shisa8J3QNX5 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Shisa8J3QNX5 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Gm9794-201ENSMUST00000202370 423 ntBASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Shisa8J3QNX5 Gm19994-201ENSMUST00000217086 586 ntBASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 91.1 ms