Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Gm43773-201ENSMUST00000198548 2162 ntBASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Ccdc180J3QNE4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Smok4a-201ENSMUST00000074512 1455 ntBASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Gm8302-201ENSMUST00000119217 852 ntBASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Gm17214-201ENSMUST00000164501 541 ntBASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Gm2594-201ENSMUST00000214774 742 ntBASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Gm22846-201ENSMUST00000157706 270 ntBASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Gm37284-201ENSMUST00000193607 539 ntBASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 AC115304.2-201ENSMUST00000226399 332 ntBASIC21.15■□□□□ 0.98
Ccdc180J3QNE4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Ccdc180J3QNE4 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Ccdc180J3QNE4 Gm43727-201ENSMUST00000198021 2647 ntBASIC21.14■□□□□ 0.98
Ccdc180J3QNE4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Ccdc180J3QNE4 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Ccdc180J3QNE4 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc180J3QNE4 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc180J3QNE4 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc180J3QNE4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccdc180J3QNE4 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Gm28424-201ENSMUST00000187393 1319 ntBASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Gm7719-201ENSMUST00000182374 975 ntBASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 AC122035.1-201ENSMUST00000227576 1016 ntBASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC21.14■□□□□ 0.97
Ccdc180J3QNE4 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Olfml3-204ENSMUST00000169286 874 ntBASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Gm44216-201ENSMUST00000203942 157 ntBASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ccdc180J3QNE4 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Gm16547-201ENSMUST00000159474 293 ntBASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Gm6548-201ENSMUST00000167498 1165 ntBASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ccdc180J3QNE4 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms