Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Gm11960-201ENSMUST00000122068 925 ntBASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Gm2546-201ENSMUST00000182630 991 ntBASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Gm37008-201ENSMUST00000195712 319 ntBASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Gm43930-201ENSMUST00000203868 845 ntBASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Pcdh1F7BJK1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Gm7722-201ENSMUST00000120646 741 ntBASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Gm27514-201ENSMUST00000183692 110 ntBASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.6□□□□□ -0.71
Pcdh1F7BJK1 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Pcdh1F7BJK1 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms