Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Gm17782-201ENSMUST00000174345 880 ntBASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Gm23694-201ENSMUST00000179335 110 ntBASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Gm7833-201ENSMUST00000183288 990 ntBASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Gm5254-201ENSMUST00000188353 977 ntBASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Gm20781-201ENSMUST00000193154 693 ntBASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Gm21736-201ENSMUST00000195399 693 ntBASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Gm44323-201ENSMUST00000198689 129 ntBASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 CT571271.1-201ENSMUST00000227071 670 ntBASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ccdc188F6WEU2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Mir1249-201ENSMUST00000116791 98 ntBASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Gm15373-201ENSMUST00000121495 214 ntBASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Gm16283-201ENSMUST00000149935 522 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Gm16547-201ENSMUST00000159474 293 ntBASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 AC134913.2-201ENSMUST00000225017 771 ntBASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.84□□□□□ -0.51
Ccdc188F6WEU2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Ccdc188F6WEU2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc188F6WEU2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms