Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm27627-201ENSMUST00000183644 150 ntBASIC12.11□□□□□ -0.47
Atf6F6VAN0 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.11□□□□□ -0.47
Atf6F6VAN0 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.11□□□□□ -0.47
Atf6F6VAN0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Atf6F6VAN0 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Gm26083-201ENSMUST00000157904 193 ntBASIC12.1□□□□□ -0.47
Atf6F6VAN0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.1□□□□□ -0.47
Atf6F6VAN0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Gm8913-201ENSMUST00000209491 641 ntBASIC12.1□□□□□ -0.47
Atf6F6VAN0 Gm17827-201ENSMUST00000211825 742 ntBASIC12.1□□□□□ -0.47
Atf6F6VAN0 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.1□□□□□ -0.47
Atf6F6VAN0 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.1□□□□□ -0.47
Atf6F6VAN0 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Atf6F6VAN0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.09□□□□□ -0.47
Atf6F6VAN0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6F6VAN0 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6F6VAN0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm5616-201ENSMUST00000165252 384 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm8741-201ENSMUST00000174736 384 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm29615-201ENSMUST00000185371 697 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm28224-201ENSMUST00000186078 697 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm29001-201ENSMUST00000186177 697 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm28292-201ENSMUST00000186593 697 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm28101-201ENSMUST00000187608 697 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm29076-201ENSMUST00000187689 697 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm28302-201ENSMUST00000187931 697 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm28646-201ENSMUST00000188220 697 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm28205-201ENSMUST00000189177 697 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm29032-201ENSMUST00000189797 697 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm28695-201ENSMUST00000190300 697 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm37448-201ENSMUST00000192795 697 ntBASIC12.09□□□□□ -0.47
Atf6F6VAN0 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms