Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm25580-201ENSMUST00000083409 327 ntBASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm13592-201ENSMUST00000118148 1010 ntBASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm9164-201ENSMUST00000118700 1014 ntBASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm15641-201ENSMUST00000161407 670 ntTSL 3 BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm17799-201ENSMUST00000183270 667 ntBASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm30619-201ENSMUST00000213962 686 ntBASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 CT009539.1-201ENSMUST00000226465 220 ntBASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm22669-201ENSMUST00000158723 318 ntBASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 2010009K17Rik-201ENSMUST00000186977 567 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm19058-201ENSMUST00000192135 598 ntBASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 AC165260.2-201ENSMUST00000225371 395 ntBASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 AC163351.1-201ENSMUST00000225539 737 ntBASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Apex1-201ENSMUST00000049411 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Olfr1512-201ENSMUST00000071221 942 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Col6a3E9PWQ3 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Smok3c-202ENSMUST00000178402 1515 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gm14676-201ENSMUST00000117722 858 ntBASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gm28653-202ENSMUST00000227082 521 ntBASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 AC154760.1-201ENSMUST00000227218 673 ntBASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Calb2-202ENSMUST00000212297 1080 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gm33466-201ENSMUST00000199819 1689 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Col6a3E9PWQ3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Gm8302-201ENSMUST00000119217 852 ntBASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Gm12464-201ENSMUST00000121385 1016 ntBASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.36□□□□□ -0.59
Col6a3E9PWQ3 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms