Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Hfm1D3Z4R1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm12418-201ENSMUST00000118116 942 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm11993-201ENSMUST00000121861 820 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm9625-201ENSMUST00000180422 955 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm18010-201ENSMUST00000203553 202 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm5740-201ENSMUST00000211003 1857 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm45003-201ENSMUST00000205875 2158 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm29100-201ENSMUST00000187564 4410 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm9915-201ENSMUST00000066196 1383 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm14052-201ENSMUST00000121434 1031 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm5529-201ENSMUST00000165691 891 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm23647-201ENSMUST00000175042 109 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Rn5s-201ENSMUST00000177555 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s108-201ENSMUST00000177575 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s121-201ENSMUST00000177589 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s146-201ENSMUST00000177889 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm22109-201ENSMUST00000177995 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm22291-201ENSMUST00000178027 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s141-201ENSMUST00000178066 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm23284-201ENSMUST00000178069 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s100-201ENSMUST00000178106 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s111-201ENSMUST00000178203 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s105-201ENSMUST00000178499 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s149-201ENSMUST00000178520 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s103-201ENSMUST00000178755 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s123-201ENSMUST00000178804 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s142-201ENSMUST00000178820 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s144-201ENSMUST00000178859 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s139-201ENSMUST00000178975 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s134-201ENSMUST00000178983 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s136-201ENSMUST00000179080 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm25018-201ENSMUST00000179081 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s104-201ENSMUST00000179107 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s113-201ENSMUST00000179143 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s133-201ENSMUST00000179275 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s117-201ENSMUST00000179431 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm25212-201ENSMUST00000179432 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s138-201ENSMUST00000179476 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s122-201ENSMUST00000179500 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s143-201ENSMUST00000179542 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s107-201ENSMUST00000179704 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm26391-201ENSMUST00000179843 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s110-201ENSMUST00000179995 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s128-201ENSMUST00000180096 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 n-R5s124-201ENSMUST00000180334 119 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm37391-201ENSMUST00000194891 2318 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm6653-201ENSMUST00000218063 1288 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm4930-201ENSMUST00000219926 1087 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Gm24089-201ENSMUST00000093696 109 ntBASIC16.28■□□□□ 0.2
Hfm1D3Z4R1 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hfm1D3Z4R1 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hfm1D3Z4R1 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hfm1D3Z4R1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hfm1D3Z4R1 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 459.1 ms