Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm9136-201ENSMUST00000193368 454 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm8342-201ENSMUST00000209839 757 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 Gm26035-201ENSMUST00000083065 308 ntBASIC10.58□□□□□ -0.72
Shank1D3YZU1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.57□□□□□ -0.72
Shank1D3YZU1 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.57□□□□□ -0.72
Shank1D3YZU1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Gm13019-201ENSMUST00000120000 276 ntBASIC10.57□□□□□ -0.72
Shank1D3YZU1 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Gm5700-201ENSMUST00000191483 989 ntBASIC10.57□□□□□ -0.72
Shank1D3YZU1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.57□□□□□ -0.72
Shank1D3YZU1 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.57□□□□□ -0.72
Shank1D3YZU1 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.57□□□□□ -0.72
Shank1D3YZU1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.57□□□□□ -0.72
Shank1D3YZU1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Shank1D3YZU1 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gm14807-201ENSMUST00000116640 983 ntBASIC10.56□□□□□ -0.72
Shank1D3YZU1 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gm11244-201ENSMUST00000121243 237 ntBASIC10.56□□□□□ -0.72
Shank1D3YZU1 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gm18776-201ENSMUST00000188833 654 ntBASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.56□□□□□ -0.72
Shank1D3YZU1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gm5805-201ENSMUST00000072779 456 ntBASIC10.56□□□□□ -0.72
Shank1D3YZU1 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.56□□□□□ -0.72
Shank1D3YZU1 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.56□□□□□ -0.72
Shank1D3YZU1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.56□□□□□ -0.72
Shank1D3YZU1 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Shank1D3YZU1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms