Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm7210-201ENSMUST00000209309 1067 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm9701-201ENSMUST00000077976 427 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm8146-201ENSMUST00000192106 1847 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm8754-201ENSMUST00000118391 520 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm9089-201ENSMUST00000122027 526 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm16547-201ENSMUST00000159474 293 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm23647-201ENSMUST00000175042 109 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Rn5s-201ENSMUST00000177555 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s108-201ENSMUST00000177575 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s121-201ENSMUST00000177589 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s146-201ENSMUST00000177889 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm22109-201ENSMUST00000177995 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm22291-201ENSMUST00000178027 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s141-201ENSMUST00000178066 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm23284-201ENSMUST00000178069 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s100-201ENSMUST00000178106 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s111-201ENSMUST00000178203 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s105-201ENSMUST00000178499 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s149-201ENSMUST00000178520 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s103-201ENSMUST00000178755 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s123-201ENSMUST00000178804 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s142-201ENSMUST00000178820 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s144-201ENSMUST00000178859 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s139-201ENSMUST00000178975 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s134-201ENSMUST00000178983 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s136-201ENSMUST00000179080 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm25018-201ENSMUST00000179081 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s104-201ENSMUST00000179107 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s113-201ENSMUST00000179143 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s133-201ENSMUST00000179275 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s117-201ENSMUST00000179431 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm25212-201ENSMUST00000179432 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s138-201ENSMUST00000179476 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s122-201ENSMUST00000179500 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s143-201ENSMUST00000179542 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s107-201ENSMUST00000179704 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm26391-201ENSMUST00000179843 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s110-201ENSMUST00000179995 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s128-201ENSMUST00000180096 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 n-R5s124-201ENSMUST00000180334 119 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Chd6A3KFM7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 Gm24089-201ENSMUST00000093696 109 ntBASIC9.47□□□□□ -0.89
Chd6A3KFM7 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Chd6A3KFM7 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Gm12912-201ENSMUST00000121596 1381 ntBASIC9.46□□□□□ -0.89
Chd6A3KFM7 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Gm22937-201ENSMUST00000103954 131 ntBASIC9.46□□□□□ -0.89
Chd6A3KFM7 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Gm12435-201ENSMUST00000118949 1016 ntBASIC9.46□□□□□ -0.89
Chd6A3KFM7 Actg2-202ENSMUST00000121731 1273 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Gm5808-201ENSMUST00000178090 357 ntBASIC9.46□□□□□ -0.89
Chd6A3KFM7 Gm38117-201ENSMUST00000194653 939 ntBASIC9.46□□□□□ -0.89
Chd6A3KFM7 Gm8643-201ENSMUST00000195228 625 ntBASIC9.46□□□□□ -0.89
Chd6A3KFM7 Gm42687-201ENSMUST00000199075 164 ntBASIC9.46□□□□□ -0.89
Chd6A3KFM7 Gm44173-201ENSMUST00000204316 132 ntBASIC9.46□□□□□ -0.89
Chd6A3KFM7 Gm29689-201ENSMUST00000221076 589 ntBASIC9.46□□□□□ -0.89
Chd6A3KFM7 Capsl-202ENSMUST00000226688 739 ntBASIC9.46□□□□□ -0.89
Chd6A3KFM7 Gm5468-202ENSMUST00000227851 682 ntBASIC9.46□□□□□ -0.89
Chd6A3KFM7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Chd6A3KFM7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Gm17836-201ENSMUST00000191976 1302 ntBASIC9.46□□□□□ -0.9
Chd6A3KFM7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd6A3KFM7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC9.46□□□□□ -0.9
Chd6A3KFM7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Chd6A3KFM7 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms