Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdc40Q9DC48 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdc40Q9DC48 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdc40Q9DC48 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdc40Q9DC48 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.01■□□□□ 0.63
Cdc40Q9DC48 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.01■□□□□ 0.63
Cdc40Q9DC48 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdc40Q9DC48 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdc40Q9DC48 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdc40Q9DC48 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Cdc40Q9DC48 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdc40Q9DC48 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.01■□□□□ 0.63
Cdc40Q9DC48 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdc40Q9DC48 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdc40Q9DC48 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdc40Q9DC48 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdc40Q9DC48 Gm43403-201ENSMUST00000198011 1786 ntBASIC19■□□□□ 0.63
Cdc40Q9DC48 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Cdc40Q9DC48 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdc40Q9DC48 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdc40Q9DC48 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdc40Q9DC48 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdc40Q9DC48 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdc40Q9DC48 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdc40Q9DC48 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdc40Q9DC48 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdc40Q9DC48 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdc40Q9DC48 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdc40Q9DC48 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdc40Q9DC48 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdc40Q9DC48 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdc40Q9DC48 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdc40Q9DC48 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cdc40Q9DC48 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Cdc40Q9DC48 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdc40Q9DC48 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cdc40Q9DC48 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdc40Q9DC48 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdc40Q9DC48 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cdc40Q9DC48 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.96■□□□□ 0.63
Cdc40Q9DC48 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.96■□□□□ 0.63
Cdc40Q9DC48 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.96■□□□□ 0.63
Cdc40Q9DC48 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Cdc40Q9DC48 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdc40Q9DC48 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Cdc40Q9DC48 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdc40Q9DC48 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cdc40Q9DC48 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdc40Q9DC48 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdc40Q9DC48 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Cdc40Q9DC48 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.95■□□□□ 0.62
Cdc40Q9DC48 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.95■□□□□ 0.62
Cdc40Q9DC48 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Cdc40Q9DC48 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Cdc40Q9DC48 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdc40Q9DC48 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdc40Q9DC48 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Cdc40Q9DC48 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdc40Q9DC48 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.94■□□□□ 0.62
Cdc40Q9DC48 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.94■□□□□ 0.62
Cdc40Q9DC48 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.94■□□□□ 0.62
Cdc40Q9DC48 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdc40Q9DC48 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdc40Q9DC48 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.93■□□□□ 0.62
Cdc40Q9DC48 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cdc40Q9DC48 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdc40Q9DC48 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdc40Q9DC48 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdc40Q9DC48 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdc40Q9DC48 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Cdc40Q9DC48 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdc40Q9DC48 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdc40Q9DC48 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Cdc40Q9DC48 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdc40Q9DC48 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdc40Q9DC48 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdc40Q9DC48 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cdc40Q9DC48 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Cdc40Q9DC48 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdc40Q9DC48 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cdc40Q9DC48 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdc40Q9DC48 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdc40Q9DC48 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.91■□□□□ 0.62
Cdc40Q9DC48 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.91■□□□□ 0.62
Cdc40Q9DC48 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdc40Q9DC48 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdc40Q9DC48 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdc40Q9DC48 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdc40Q9DC48 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cdc40Q9DC48 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
Cdc40Q9DC48 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdc40Q9DC48 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cdc40Q9DC48 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdc40Q9DC48 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.9■□□□□ 0.62
Cdc40Q9DC48 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cdc40Q9DC48 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdc40Q9DC48 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdc40Q9DC48 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdc40Q9DC48 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cdc40Q9DC48 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms