Protein–RNA interactions for Protein: Q9D7Z6

Clca1, Calcium-activated chloride channel regulator 1, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca1Q9D7Z6 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clca1Q9D7Z6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clca1Q9D7Z6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clca1Q9D7Z6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clca1Q9D7Z6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Clca1Q9D7Z6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Clca1Q9D7Z6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Clca1Q9D7Z6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.64■□□□□ 0.9
Clca1Q9D7Z6 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.64■□□□□ 0.9
Clca1Q9D7Z6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Clca1Q9D7Z6 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Clca1Q9D7Z6 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.64■□□□□ 0.89
Clca1Q9D7Z6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clca1Q9D7Z6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clca1Q9D7Z6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clca1Q9D7Z6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.64■□□□□ 0.89
Clca1Q9D7Z6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Clca1Q9D7Z6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clca1Q9D7Z6 Notumos-201ENSMUST00000151998 2659 ntBASIC20.64■□□□□ 0.89
Clca1Q9D7Z6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Clca1Q9D7Z6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clca1Q9D7Z6 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.63■□□□□ 0.89
Clca1Q9D7Z6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Clca1Q9D7Z6 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Clca1Q9D7Z6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.63■□□□□ 0.89
Clca1Q9D7Z6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Clca1Q9D7Z6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Clca1Q9D7Z6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clca1Q9D7Z6 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clca1Q9D7Z6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Clca1Q9D7Z6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Clca1Q9D7Z6 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca1Q9D7Z6 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca1Q9D7Z6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca1Q9D7Z6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca1Q9D7Z6 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.6■□□□□ 0.89
Clca1Q9D7Z6 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca1Q9D7Z6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca1Q9D7Z6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca1Q9D7Z6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Clca1Q9D7Z6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Clca1Q9D7Z6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca1Q9D7Z6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca1Q9D7Z6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca1Q9D7Z6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca1Q9D7Z6 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.59■□□□□ 0.89
Clca1Q9D7Z6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca1Q9D7Z6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Clca1Q9D7Z6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Clca1Q9D7Z6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca1Q9D7Z6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Clca1Q9D7Z6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.58■□□□□ 0.89
Clca1Q9D7Z6 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.58■□□□□ 0.89
Clca1Q9D7Z6 Gm7417-201ENSMUST00000192950 473 ntBASIC20.58■□□□□ 0.89
Clca1Q9D7Z6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.58■□□□□ 0.89
Clca1Q9D7Z6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
Clca1Q9D7Z6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Clca1Q9D7Z6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Clca1Q9D7Z6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Clca1Q9D7Z6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.57■□□□□ 0.88
Clca1Q9D7Z6 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Clca1Q9D7Z6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clca1Q9D7Z6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.56■□□□□ 0.88
Clca1Q9D7Z6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Clca1Q9D7Z6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clca1Q9D7Z6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.55■□□□□ 0.88
Clca1Q9D7Z6 Gm40881-201ENSMUST00000223397 166 ntBASIC20.55■□□□□ 0.88
Clca1Q9D7Z6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clca1Q9D7Z6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Clca1Q9D7Z6 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clca1Q9D7Z6 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.55■□□□□ 0.88
Clca1Q9D7Z6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clca1Q9D7Z6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clca1Q9D7Z6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Clca1Q9D7Z6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Clca1Q9D7Z6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clca1Q9D7Z6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Clca1Q9D7Z6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clca1Q9D7Z6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
Clca1Q9D7Z6 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.53■□□□□ 0.88
Clca1Q9D7Z6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.53■□□□□ 0.88
Clca1Q9D7Z6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Clca1Q9D7Z6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Clca1Q9D7Z6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Clca1Q9D7Z6 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Clca1Q9D7Z6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Clca1Q9D7Z6 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.52■□□□□ 0.88
Clca1Q9D7Z6 Gm10399-202ENSMUST00000202768 748 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms