Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Khdc3Q9CWU5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Khdc3Q9CWU5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Khdc3Q9CWU5 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Khdc3Q9CWU5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Khdc3Q9CWU5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc3Q9CWU5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc3Q9CWU5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc3Q9CWU5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc3Q9CWU5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc3Q9CWU5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc3Q9CWU5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc3Q9CWU5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc3Q9CWU5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc3Q9CWU5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.68■□□□□ 0.74
Khdc3Q9CWU5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Khdc3Q9CWU5 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Khdc3Q9CWU5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
Khdc3Q9CWU5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Khdc3Q9CWU5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Khdc3Q9CWU5 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Khdc3Q9CWU5 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.67■□□□□ 0.74
Khdc3Q9CWU5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Khdc3Q9CWU5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Khdc3Q9CWU5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Khdc3Q9CWU5 Gm15820-201ENSMUST00000201566 728 ntBASIC19.66■□□□□ 0.74
Khdc3Q9CWU5 Gm10399-202ENSMUST00000202768 748 ntBASIC19.66■□□□□ 0.74
Khdc3Q9CWU5 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.66■□□□□ 0.74
Khdc3Q9CWU5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Khdc3Q9CWU5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Khdc3Q9CWU5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Khdc3Q9CWU5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Khdc3Q9CWU5 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Khdc3Q9CWU5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc3Q9CWU5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.65■□□□□ 0.74
Khdc3Q9CWU5 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc3Q9CWU5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc3Q9CWU5 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.65■□□□□ 0.74
Khdc3Q9CWU5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Khdc3Q9CWU5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Khdc3Q9CWU5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Khdc3Q9CWU5 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.64■□□□□ 0.74
Khdc3Q9CWU5 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Khdc3Q9CWU5 Gm5812-201ENSMUST00000061073 957 ntBASIC19.64■□□□□ 0.73
Khdc3Q9CWU5 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Khdc3Q9CWU5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Khdc3Q9CWU5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Khdc3Q9CWU5 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Khdc3Q9CWU5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Khdc3Q9CWU5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Khdc3Q9CWU5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Khdc3Q9CWU5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Khdc3Q9CWU5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc3Q9CWU5 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc3Q9CWU5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc3Q9CWU5 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc3Q9CWU5 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.63■□□□□ 0.73
Khdc3Q9CWU5 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.63■□□□□ 0.73
Khdc3Q9CWU5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Khdc3Q9CWU5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
Khdc3Q9CWU5 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Khdc3Q9CWU5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Khdc3Q9CWU5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Khdc3Q9CWU5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Khdc3Q9CWU5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.62■□□□□ 0.73
Khdc3Q9CWU5 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.62■□□□□ 0.73
Khdc3Q9CWU5 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Khdc3Q9CWU5 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Khdc3Q9CWU5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Khdc3Q9CWU5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Khdc3Q9CWU5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.62■□□□□ 0.73
Khdc3Q9CWU5 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Khdc3Q9CWU5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Khdc3Q9CWU5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Khdc3Q9CWU5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Khdc3Q9CWU5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Khdc3Q9CWU5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Khdc3Q9CWU5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.6■□□□□ 0.73
Khdc3Q9CWU5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc3Q9CWU5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc3Q9CWU5 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Khdc3Q9CWU5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.59■□□□□ 0.73
Khdc3Q9CWU5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc3Q9CWU5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc3Q9CWU5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.59■□□□□ 0.73
Khdc3Q9CWU5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc3Q9CWU5 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Khdc3Q9CWU5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Khdc3Q9CWU5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Khdc3Q9CWU5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Khdc3Q9CWU5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Khdc3Q9CWU5 Gm15546-201ENSMUST00000122095 826 ntBASIC19.58■□□□□ 0.72
Khdc3Q9CWU5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Khdc3Q9CWU5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Khdc3Q9CWU5 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Khdc3Q9CWU5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Khdc3Q9CWU5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Khdc3Q9CWU5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.57■□□□□ 0.72
Khdc3Q9CWU5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.57■□□□□ 0.72
Khdc3Q9CWU5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms