Protein–RNA interactions for Protein: Q99PV8

Bcl11b, B-cell lymphoma/leukemia 11B, mousemouse

Predictions only

Length 884 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bcl11bQ99PV8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Bcl11bQ99PV8 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Bcl11bQ99PV8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC28.32■■■□□ 2.12
Bcl11bQ99PV8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Bcl11bQ99PV8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Bcl11bQ99PV8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
Bcl11bQ99PV8 Gm12527-201ENSMUST00000117967 564 ntBASIC28.31■■■□□ 2.12
Bcl11bQ99PV8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Bcl11bQ99PV8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC28.31■■■□□ 2.12
Bcl11bQ99PV8 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Bcl11bQ99PV8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC28.3■■■□□ 2.12
Bcl11bQ99PV8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC28.3■■■□□ 2.12
Bcl11bQ99PV8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC28.3■■■□□ 2.12
Bcl11bQ99PV8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Bcl11bQ99PV8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Bcl11bQ99PV8 Mir5133-201ENSMUST00000174955 77 ntBASIC28.3■■■□□ 2.12
Bcl11bQ99PV8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Bcl11bQ99PV8 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Bcl11bQ99PV8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC28.3■■■□□ 2.12
Bcl11bQ99PV8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Bcl11bQ99PV8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC28.29■■■□□ 2.12
Bcl11bQ99PV8 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
Bcl11bQ99PV8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Bcl11bQ99PV8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Bcl11bQ99PV8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Bcl11bQ99PV8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC28.28■■■□□ 2.12
Bcl11bQ99PV8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Bcl11bQ99PV8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Bcl11bQ99PV8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Bcl11bQ99PV8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Bcl11bQ99PV8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC28.27■■■□□ 2.12
Bcl11bQ99PV8 Gm13168-201ENSMUST00000121771 632 ntBASIC28.27■■■□□ 2.12
Bcl11bQ99PV8 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC28.27■■■□□ 2.12
Bcl11bQ99PV8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC28.26■■■□□ 2.12
Bcl11bQ99PV8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Bcl11bQ99PV8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC28.26■■■□□ 2.11
Bcl11bQ99PV8 Gm10812-201ENSMUST00000099864 546 ntBASIC28.26■■■□□ 2.11
Bcl11bQ99PV8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Bcl11bQ99PV8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Bcl11bQ99PV8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC28.25■■■□□ 2.11
Bcl11bQ99PV8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
Bcl11bQ99PV8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Bcl11bQ99PV8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Bcl11bQ99PV8 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Bcl11bQ99PV8 Gm13836-201ENSMUST00000121159 501 ntBASIC28.24■■■□□ 2.11
Bcl11bQ99PV8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Bcl11bQ99PV8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Bcl11bQ99PV8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Bcl11bQ99PV8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Bcl11bQ99PV8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Bcl11bQ99PV8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Bcl11bQ99PV8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Bcl11bQ99PV8 Gm11421-201ENSMUST00000122124 294 ntBASIC28.23■■■□□ 2.11
Bcl11bQ99PV8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
Bcl11bQ99PV8 Gm3807-201ENSMUST00000193520 1168 ntBASIC28.23■■■□□ 2.11
Bcl11bQ99PV8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Bcl11bQ99PV8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC28.23■■■□□ 2.11
Bcl11bQ99PV8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
Bcl11bQ99PV8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Bcl11bQ99PV8 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC28.22■■■□□ 2.11
Bcl11bQ99PV8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC28.22■■■□□ 2.11
Bcl11bQ99PV8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC28.22■■■□□ 2.11
Bcl11bQ99PV8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC28.22■■■□□ 2.11
Bcl11bQ99PV8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC28.22■■■□□ 2.11
Bcl11bQ99PV8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Bcl11bQ99PV8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Bcl11bQ99PV8 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Bcl11bQ99PV8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Bcl11bQ99PV8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Bcl11bQ99PV8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Bcl11bQ99PV8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC28.2■■■□□ 2.1
Bcl11bQ99PV8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
Bcl11bQ99PV8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Bcl11bQ99PV8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Bcl11bQ99PV8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Bcl11bQ99PV8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Bcl11bQ99PV8 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Bcl11bQ99PV8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Bcl11bQ99PV8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Bcl11bQ99PV8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
Bcl11bQ99PV8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Bcl11bQ99PV8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC28.18■■■□□ 2.1
Bcl11bQ99PV8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Bcl11bQ99PV8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC28.18■■■□□ 2.1
Bcl11bQ99PV8 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC28.18■■■□□ 2.1
Bcl11bQ99PV8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
Bcl11bQ99PV8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Bcl11bQ99PV8 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Bcl11bQ99PV8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
Bcl11bQ99PV8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Bcl11bQ99PV8 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Bcl11bQ99PV8 Gm13234-201ENSMUST00000120010 747 ntBASIC28.16■■■□□ 2.1
Bcl11bQ99PV8 Gm43530-201ENSMUST00000195920 274 ntBASIC28.16■■■□□ 2.1
Bcl11bQ99PV8 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Bcl11bQ99PV8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Bcl11bQ99PV8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Bcl11bQ99PV8 Gm7514-201ENSMUST00000209475 934 ntBASIC28.15■■■□□ 2.1
Bcl11bQ99PV8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Bcl11bQ99PV8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC28.14■■■□□ 2.1
Bcl11bQ99PV8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms