Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-1Q99MA9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.37■□□□□ 0.69
Nkx6-1Q99MA9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.37■□□□□ 0.69
Nkx6-1Q99MA9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.37■□□□□ 0.69
Nkx6-1Q99MA9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-1Q99MA9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-1Q99MA9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-1Q99MA9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nkx6-1Q99MA9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Nkx6-1Q99MA9 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx6-1Q99MA9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx6-1Q99MA9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx6-1Q99MA9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Nkx6-1Q99MA9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx6-1Q99MA9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx6-1Q99MA9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nkx6-1Q99MA9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-1Q99MA9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-1Q99MA9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-1Q99MA9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-1Q99MA9 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-1Q99MA9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx6-1Q99MA9 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-1Q99MA9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-1Q99MA9 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.34■□□□□ 0.69
Nkx6-1Q99MA9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-1Q99MA9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nkx6-1Q99MA9 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nkx6-1Q99MA9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.34■□□□□ 0.69
Nkx6-1Q99MA9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-1Q99MA9 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-1Q99MA9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-1Q99MA9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx6-1Q99MA9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Nkx6-1Q99MA9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx6-1Q99MA9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
Nkx6-1Q99MA9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx6-1Q99MA9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
Nkx6-1Q99MA9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.33■□□□□ 0.68
Nkx6-1Q99MA9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.33■□□□□ 0.68
Nkx6-1Q99MA9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-1Q99MA9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.32■□□□□ 0.68
Nkx6-1Q99MA9 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.32■□□□□ 0.68
Nkx6-1Q99MA9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.32■□□□□ 0.68
Nkx6-1Q99MA9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-1Q99MA9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx6-1Q99MA9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nkx6-1Q99MA9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-1Q99MA9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-1Q99MA9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-1Q99MA9 Gm18671-201ENSMUST00000214826 683 ntBASIC19.31■□□□□ 0.68
Nkx6-1Q99MA9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Nkx6-1Q99MA9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx6-1Q99MA9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-1Q99MA9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nkx6-1Q99MA9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-1Q99MA9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-1Q99MA9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.3■□□□□ 0.68
Nkx6-1Q99MA9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.3■□□□□ 0.68
Nkx6-1Q99MA9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-1Q99MA9 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx6-1Q99MA9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-1Q99MA9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-1Q99MA9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-1Q99MA9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nkx6-1Q99MA9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.29■□□□□ 0.68
Nkx6-1Q99MA9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.29■□□□□ 0.68
Nkx6-1Q99MA9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx6-1Q99MA9 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
Nkx6-1Q99MA9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.28■□□□□ 0.68
Nkx6-1Q99MA9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx6-1Q99MA9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx6-1Q99MA9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx6-1Q99MA9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nkx6-1Q99MA9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Nkx6-1Q99MA9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx6-1Q99MA9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-1Q99MA9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-1Q99MA9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-1Q99MA9 Gm43530-201ENSMUST00000195920 274 ntBASIC19.26■□□□□ 0.67
Nkx6-1Q99MA9 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-1Q99MA9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-1Q99MA9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-1Q99MA9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-1Q99MA9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx6-1Q99MA9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-1Q99MA9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.25■□□□□ 0.67
Nkx6-1Q99MA9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Nkx6-1Q99MA9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-1Q99MA9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.25■□□□□ 0.67
Nkx6-1Q99MA9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Nkx6-1Q99MA9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-1Q99MA9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-1Q99MA9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Nkx6-1Q99MA9 AV356131-201ENSMUST00000206201 750 ntBASIC19.24■□□□□ 0.67
Nkx6-1Q99MA9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.24■□□□□ 0.67
Nkx6-1Q99MA9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Nkx6-1Q99MA9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Nkx6-1Q99MA9 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Nkx6-1Q99MA9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms