Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb5Q91XZ5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb5Q91XZ5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb5Q91XZ5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb5Q91XZ5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb5Q91XZ5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb5Q91XZ5 Gm43173-201ENSMUST00000202246 593 ntBASIC24.36■■□□□ 1.49
Pcdhb5Q91XZ5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb5Q91XZ5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Pcdhb5Q91XZ5 Gm12251-201ENSMUST00000117893 792 ntBASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb5Q91XZ5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.32■■□□□ 1.48
Pcdhb5Q91XZ5 Gm7160-202ENSMUST00000188519 1027 ntBASIC24.32■■□□□ 1.48
Pcdhb5Q91XZ5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC24.32■■□□□ 1.48
Pcdhb5Q91XZ5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb5Q91XZ5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb5Q91XZ5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.3■■□□□ 1.48
Pcdhb5Q91XZ5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb5Q91XZ5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb5Q91XZ5 Gm6085-201ENSMUST00000182774 1470 ntBASIC24.3■■□□□ 1.48
Pcdhb5Q91XZ5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb5Q91XZ5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Pcdhb5Q91XZ5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb5Q91XZ5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb5Q91XZ5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb5Q91XZ5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb5Q91XZ5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms