Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb5Q91XZ5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb5Q91XZ5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
Pcdhb5Q91XZ5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Pcdhb5Q91XZ5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Pcdhb5Q91XZ5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Pcdhb5Q91XZ5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb5Q91XZ5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb5Q91XZ5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb5Q91XZ5 Gm43173-201ENSMUST00000202246 593 ntBASIC24.36■■□□□ 1.49
Pcdhb5Q91XZ5 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Pcdhb5Q91XZ5 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Pcdhb5Q91XZ5 Gm12251-201ENSMUST00000117893 792 ntBASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
Pcdhb5Q91XZ5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
Pcdhb5Q91XZ5 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Pcdhb5Q91XZ5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb5Q91XZ5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC24.32■■□□□ 1.48
Pcdhb5Q91XZ5 Gm7160-202ENSMUST00000188519 1027 ntBASIC24.32■■□□□ 1.48
Pcdhb5Q91XZ5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC24.32■■□□□ 1.48
Pcdhb5Q91XZ5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Pcdhb5Q91XZ5 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Pcdhb5Q91XZ5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb5Q91XZ5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC24.3■■□□□ 1.48
Pcdhb5Q91XZ5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb5Q91XZ5 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb5Q91XZ5 Gm6085-201ENSMUST00000182774 1470 ntBASIC24.3■■□□□ 1.48
Pcdhb5Q91XZ5 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Pcdhb5Q91XZ5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pcdhb5Q91XZ5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Pcdhb5Q91XZ5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb5Q91XZ5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb5Q91XZ5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb5Q91XZ5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Pcdhb5Q91XZ5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms