Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb2Q91XX7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb2Q91XX7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhgb2Q91XX7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb2Q91XX7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb2Q91XX7 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb2Q91XX7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb2Q91XX7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb2Q91XX7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb2Q91XX7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb2Q91XX7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhgb2Q91XX7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhgb2Q91XX7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb2Q91XX7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb2Q91XX7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb2Q91XX7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhgb2Q91XX7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb2Q91XX7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.26■□□□□ 0.67
Pcdhgb2Q91XX7 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb2Q91XX7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb2Q91XX7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb2Q91XX7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb2Q91XX7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb2Q91XX7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhgb2Q91XX7 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb2Q91XX7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb2Q91XX7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb2Q91XX7 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb2Q91XX7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcdhgb2Q91XX7 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb2Q91XX7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb2Q91XX7 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb2Q91XX7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.24■□□□□ 0.67
Pcdhgb2Q91XX7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb2Q91XX7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhgb2Q91XX7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb2Q91XX7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhgb2Q91XX7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb2Q91XX7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb2Q91XX7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb2Q91XX7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb2Q91XX7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdhgb2Q91XX7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhgb2Q91XX7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.23■□□□□ 0.67
Pcdhgb2Q91XX7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb2Q91XX7 Gm14523-201ENSMUST00000117260 558 ntBASIC19.23■□□□□ 0.67
Pcdhgb2Q91XX7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb2Q91XX7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgb2Q91XX7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdhgb2Q91XX7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb2Q91XX7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb2Q91XX7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgb2Q91XX7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb2Q91XX7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.21■□□□□ 0.67
Pcdhgb2Q91XX7 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.21■□□□□ 0.67
Pcdhgb2Q91XX7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb2Q91XX7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdhgb2Q91XX7 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb2Q91XX7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb2Q91XX7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgb2Q91XX7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.2■□□□□ 0.66
Pcdhgb2Q91XX7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb2Q91XX7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb2Q91XX7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdhgb2Q91XX7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhgb2Q91XX7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb2Q91XX7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb2Q91XX7 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgb2Q91XX7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhgb2Q91XX7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb2Q91XX7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdhgb2Q91XX7 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgb2Q91XX7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.18■□□□□ 0.66
Pcdhgb2Q91XX7 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb2Q91XX7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.18■□□□□ 0.66
Pcdhgb2Q91XX7 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb2Q91XX7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb2Q91XX7 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.18■□□□□ 0.66
Pcdhgb2Q91XX7 Gm27502-201ENSMUST00000183495 199 ntBASIC19.18■□□□□ 0.66
Pcdhgb2Q91XX7 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.18■□□□□ 0.66
Pcdhgb2Q91XX7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdhgb2Q91XX7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb2Q91XX7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgb2Q91XX7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhgb2Q91XX7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhgb2Q91XX7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms