Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tram1Q91V04 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tram1Q91V04 Gm11599-201ENSMUST00000118720 878 ntBASIC17.64■□□□□ 0.41
Tram1Q91V04 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Tram1Q91V04 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Tram1Q91V04 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tram1Q91V04 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Tram1Q91V04 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tram1Q91V04 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Tram1Q91V04 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.63■□□□□ 0.41
Tram1Q91V04 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tram1Q91V04 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.63■□□□□ 0.41
Tram1Q91V04 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tram1Q91V04 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.63■□□□□ 0.41
Tram1Q91V04 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.63■□□□□ 0.41
Tram1Q91V04 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Tram1Q91V04 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tram1Q91V04 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tram1Q91V04 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tram1Q91V04 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tram1Q91V04 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Tram1Q91V04 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tram1Q91V04 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tram1Q91V04 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tram1Q91V04 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.62■□□□□ 0.41
Tram1Q91V04 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Tram1Q91V04 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tram1Q91V04 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tram1Q91V04 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tram1Q91V04 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tram1Q91V04 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tram1Q91V04 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tram1Q91V04 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tram1Q91V04 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.61■□□□□ 0.41
Tram1Q91V04 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.61■□□□□ 0.41
Tram1Q91V04 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tram1Q91V04 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.61■□□□□ 0.41
Tram1Q91V04 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tram1Q91V04 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tram1Q91V04 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tram1Q91V04 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tram1Q91V04 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Tram1Q91V04 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Tram1Q91V04 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tram1Q91V04 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tram1Q91V04 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tram1Q91V04 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tram1Q91V04 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tram1Q91V04 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tram1Q91V04 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tram1Q91V04 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tram1Q91V04 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tram1Q91V04 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tram1Q91V04 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tram1Q91V04 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tram1Q91V04 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Tram1Q91V04 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Tram1Q91V04 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tram1Q91V04 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tram1Q91V04 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.59■□□□□ 0.41
Tram1Q91V04 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.58■□□□□ 0.41
Tram1Q91V04 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Tram1Q91V04 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tram1Q91V04 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tram1Q91V04 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Tram1Q91V04 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Tram1Q91V04 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tram1Q91V04 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tram1Q91V04 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tram1Q91V04 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tram1Q91V04 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tram1Q91V04 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tram1Q91V04 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tram1Q91V04 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Tram1Q91V04 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tram1Q91V04 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Tram1Q91V04 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tram1Q91V04 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tram1Q91V04 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.57■□□□□ 0.4
Tram1Q91V04 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.57■□□□□ 0.4
Tram1Q91V04 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tram1Q91V04 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tram1Q91V04 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tram1Q91V04 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tram1Q91V04 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tram1Q91V04 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tram1Q91V04 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Tram1Q91V04 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Tram1Q91V04 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.56■□□□□ 0.4
Tram1Q91V04 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.56■□□□□ 0.4
Tram1Q91V04 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tram1Q91V04 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tram1Q91V04 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Tram1Q91V04 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tram1Q91V04 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tram1Q91V04 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tram1Q91V04 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tram1Q91V04 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Tram1Q91V04 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tram1Q91V04 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms