Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cspg4Q8VHY0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cspg4Q8VHY0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cspg4Q8VHY0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cspg4Q8VHY0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.87■□□□□ 0.45
Cspg4Q8VHY0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cspg4Q8VHY0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Cspg4Q8VHY0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cspg4Q8VHY0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cspg4Q8VHY0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.86■□□□□ 0.45
Cspg4Q8VHY0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cspg4Q8VHY0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cspg4Q8VHY0 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cspg4Q8VHY0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cspg4Q8VHY0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cspg4Q8VHY0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.84■□□□□ 0.45
Cspg4Q8VHY0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cspg4Q8VHY0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cspg4Q8VHY0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cspg4Q8VHY0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC17.84■□□□□ 0.45
Cspg4Q8VHY0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cspg4Q8VHY0 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Cspg4Q8VHY0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cspg4Q8VHY0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.83■□□□□ 0.45
Cspg4Q8VHY0 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Cspg4Q8VHY0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cspg4Q8VHY0 Gm40848-201ENSMUST00000221998 324 ntBASIC17.83■□□□□ 0.44
Cspg4Q8VHY0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
Cspg4Q8VHY0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cspg4Q8VHY0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cspg4Q8VHY0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg4Q8VHY0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg4Q8VHY0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Cspg4Q8VHY0 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.82■□□□□ 0.44
Cspg4Q8VHY0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg4Q8VHY0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cspg4Q8VHY0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.82■□□□□ 0.44
Cspg4Q8VHY0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cspg4Q8VHY0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.81■□□□□ 0.44
Cspg4Q8VHY0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg4Q8VHY0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cspg4Q8VHY0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg4Q8VHY0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg4Q8VHY0 Gm43530-201ENSMUST00000195920 274 ntBASIC17.81■□□□□ 0.44
Cspg4Q8VHY0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg4Q8VHY0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg4Q8VHY0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cspg4Q8VHY0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg4Q8VHY0 Smad6-203ENSMUST00000179458 273 ntBASIC17.8■□□□□ 0.44
Cspg4Q8VHY0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg4Q8VHY0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg4Q8VHY0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.8■□□□□ 0.44
Cspg4Q8VHY0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cspg4Q8VHY0 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.8■□□□□ 0.44
Cspg4Q8VHY0 Gm18671-201ENSMUST00000214826 683 ntBASIC17.8■□□□□ 0.44
Cspg4Q8VHY0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg4Q8VHY0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.79■□□□□ 0.44
Cspg4Q8VHY0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
Cspg4Q8VHY0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg4Q8VHY0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg4Q8VHY0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cspg4Q8VHY0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cspg4Q8VHY0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.78■□□□□ 0.44
Cspg4Q8VHY0 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.78■□□□□ 0.44
Cspg4Q8VHY0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cspg4Q8VHY0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.78■□□□□ 0.44
Cspg4Q8VHY0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cspg4Q8VHY0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.77■□□□□ 0.44
Cspg4Q8VHY0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cspg4Q8VHY0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cspg4Q8VHY0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cspg4Q8VHY0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cspg4Q8VHY0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.77■□□□□ 0.44
Cspg4Q8VHY0 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cspg4Q8VHY0 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cspg4Q8VHY0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Cspg4Q8VHY0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cspg4Q8VHY0 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cspg4Q8VHY0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg4Q8VHY0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.76■□□□□ 0.43
Cspg4Q8VHY0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cspg4Q8VHY0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg4Q8VHY0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cspg4Q8VHY0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cspg4Q8VHY0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cspg4Q8VHY0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cspg4Q8VHY0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cspg4Q8VHY0 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.75■□□□□ 0.43
Cspg4Q8VHY0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms