Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slf1Q8R3P9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slf1Q8R3P9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slf1Q8R3P9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Slf1Q8R3P9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Slf1Q8R3P9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slf1Q8R3P9 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.61■□□□□ 0.89
Slf1Q8R3P9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf1Q8R3P9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Slf1Q8R3P9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.61■□□□□ 0.89
Slf1Q8R3P9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slf1Q8R3P9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slf1Q8R3P9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slf1Q8R3P9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.58■□□□□ 0.89
Slf1Q8R3P9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slf1Q8R3P9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Slf1Q8R3P9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Gm27502-201ENSMUST00000183495 199 ntBASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 7.2 ms