Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Slf1Q8R3P9 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slf1Q8R3P9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slf1Q8R3P9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slf1Q8R3P9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slf1Q8R3P9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slf1Q8R3P9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Slf1Q8R3P9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Slf1Q8R3P9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Slf1Q8R3P9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slf1Q8R3P9 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.61■□□□□ 0.89
Slf1Q8R3P9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slf1Q8R3P9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Slf1Q8R3P9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.61■□□□□ 0.89
Slf1Q8R3P9 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Slf1Q8R3P9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slf1Q8R3P9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slf1Q8R3P9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slf1Q8R3P9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slf1Q8R3P9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.58■□□□□ 0.89
Slf1Q8R3P9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Slf1Q8R3P9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Slf1Q8R3P9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Gm27502-201ENSMUST00000183495 199 ntBASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Slf1Q8R3P9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slf1Q8R3P9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slf1Q8R3P9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms