Protein–RNA interactions for Protein: Q8R2U0

Seh1l, Nucleoporin SEH1, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Seh1lQ8R2U0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Seh1lQ8R2U0 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.58■□□□□ 0.56
Seh1lQ8R2U0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Seh1lQ8R2U0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Seh1lQ8R2U0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Seh1lQ8R2U0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Seh1lQ8R2U0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Seh1lQ8R2U0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Seh1lQ8R2U0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Seh1lQ8R2U0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Seh1lQ8R2U0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Seh1lQ8R2U0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Seh1lQ8R2U0 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.56■□□□□ 0.56
Seh1lQ8R2U0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Seh1lQ8R2U0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Seh1lQ8R2U0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Seh1lQ8R2U0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Seh1lQ8R2U0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Seh1lQ8R2U0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Seh1lQ8R2U0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Seh1lQ8R2U0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Seh1lQ8R2U0 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Seh1lQ8R2U0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.56■□□□□ 0.56
Seh1lQ8R2U0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Seh1lQ8R2U0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Seh1lQ8R2U0 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.55■□□□□ 0.56
Seh1lQ8R2U0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Seh1lQ8R2U0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Seh1lQ8R2U0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.55■□□□□ 0.56
Seh1lQ8R2U0 Gm21956-201ENSMUST00000179946 522 ntBASIC18.55■□□□□ 0.56
Seh1lQ8R2U0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Seh1lQ8R2U0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Seh1lQ8R2U0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Seh1lQ8R2U0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Seh1lQ8R2U0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Seh1lQ8R2U0 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.54■□□□□ 0.56
Seh1lQ8R2U0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Seh1lQ8R2U0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Seh1lQ8R2U0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.54■□□□□ 0.56
Seh1lQ8R2U0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Seh1lQ8R2U0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Seh1lQ8R2U0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Seh1lQ8R2U0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Seh1lQ8R2U0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Seh1lQ8R2U0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Seh1lQ8R2U0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Seh1lQ8R2U0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Seh1lQ8R2U0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Seh1lQ8R2U0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
Seh1lQ8R2U0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.53■□□□□ 0.56
Seh1lQ8R2U0 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Seh1lQ8R2U0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Seh1lQ8R2U0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Seh1lQ8R2U0 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Seh1lQ8R2U0 Gm9847-201ENSMUST00000052528 599 ntBASIC18.53■□□□□ 0.56
Seh1lQ8R2U0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.53■□□□□ 0.56
Seh1lQ8R2U0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Seh1lQ8R2U0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.52■□□□□ 0.56
Seh1lQ8R2U0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Seh1lQ8R2U0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Seh1lQ8R2U0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Seh1lQ8R2U0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Seh1lQ8R2U0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Seh1lQ8R2U0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Seh1lQ8R2U0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Seh1lQ8R2U0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Seh1lQ8R2U0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Seh1lQ8R2U0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Seh1lQ8R2U0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Seh1lQ8R2U0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.52■□□□□ 0.55
Seh1lQ8R2U0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Seh1lQ8R2U0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Seh1lQ8R2U0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
Seh1lQ8R2U0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Seh1lQ8R2U0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Seh1lQ8R2U0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Seh1lQ8R2U0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.51■□□□□ 0.55
Seh1lQ8R2U0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Seh1lQ8R2U0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Seh1lQ8R2U0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Seh1lQ8R2U0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Seh1lQ8R2U0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Seh1lQ8R2U0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Seh1lQ8R2U0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Seh1lQ8R2U0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Seh1lQ8R2U0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Seh1lQ8R2U0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Seh1lQ8R2U0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Seh1lQ8R2U0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Seh1lQ8R2U0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.49■□□□□ 0.55
Seh1lQ8R2U0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Seh1lQ8R2U0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Seh1lQ8R2U0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Seh1lQ8R2U0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.48■□□□□ 0.55
Seh1lQ8R2U0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Seh1lQ8R2U0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Seh1lQ8R2U0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Seh1lQ8R2U0 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.47■□□□□ 0.55
Seh1lQ8R2U0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Seh1lQ8R2U0 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms