Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nudcd3Q8R1N4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nudcd3Q8R1N4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nudcd3Q8R1N4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nudcd3Q8R1N4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nudcd3Q8R1N4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Nudcd3Q8R1N4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nudcd3Q8R1N4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nudcd3Q8R1N4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Nudcd3Q8R1N4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nudcd3Q8R1N4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Nudcd3Q8R1N4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nudcd3Q8R1N4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nudcd3Q8R1N4 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nudcd3Q8R1N4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.48■□□□□ 0.87
Nudcd3Q8R1N4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nudcd3Q8R1N4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Nudcd3Q8R1N4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nudcd3Q8R1N4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.47■□□□□ 0.87
Nudcd3Q8R1N4 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.47■□□□□ 0.87
Nudcd3Q8R1N4 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nudcd3Q8R1N4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nudcd3Q8R1N4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nudcd3Q8R1N4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Nudcd3Q8R1N4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nudcd3Q8R1N4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nudcd3Q8R1N4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Nudcd3Q8R1N4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.45■□□□□ 0.86
Nudcd3Q8R1N4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Nudcd3Q8R1N4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.45■□□□□ 0.86
Nudcd3Q8R1N4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nudcd3Q8R1N4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nudcd3Q8R1N4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nudcd3Q8R1N4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.45■□□□□ 0.86
Nudcd3Q8R1N4 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nudcd3Q8R1N4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nudcd3Q8R1N4 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nudcd3Q8R1N4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nudcd3Q8R1N4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nudcd3Q8R1N4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Nudcd3Q8R1N4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.43■□□□□ 0.86
Nudcd3Q8R1N4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nudcd3Q8R1N4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nudcd3Q8R1N4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nudcd3Q8R1N4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nudcd3Q8R1N4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nudcd3Q8R1N4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nudcd3Q8R1N4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nudcd3Q8R1N4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nudcd3Q8R1N4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nudcd3Q8R1N4 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nudcd3Q8R1N4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nudcd3Q8R1N4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nudcd3Q8R1N4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Nudcd3Q8R1N4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nudcd3Q8R1N4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nudcd3Q8R1N4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nudcd3Q8R1N4 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nudcd3Q8R1N4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nudcd3Q8R1N4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nudcd3Q8R1N4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms