Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pdlim2Q8R1G6 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.78■■□□□ 1.4
Pdlim2Q8R1G6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.78■■□□□ 1.4
Pdlim2Q8R1G6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pdlim2Q8R1G6 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pdlim2Q8R1G6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pdlim2Q8R1G6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.77■■□□□ 1.4
Pdlim2Q8R1G6 Gm4799-201ENSMUST00000095396 657 ntBASIC23.77■■□□□ 1.4
Pdlim2Q8R1G6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pdlim2Q8R1G6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC23.77■■□□□ 1.4
Pdlim2Q8R1G6 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
Pdlim2Q8R1G6 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pdlim2Q8R1G6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pdlim2Q8R1G6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
Pdlim2Q8R1G6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
Pdlim2Q8R1G6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Pdlim2Q8R1G6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pdlim2Q8R1G6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pdlim2Q8R1G6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pdlim2Q8R1G6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pdlim2Q8R1G6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC23.76■■□□□ 1.39
Pdlim2Q8R1G6 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
Pdlim2Q8R1G6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pdlim2Q8R1G6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC23.75■■□□□ 1.39
Pdlim2Q8R1G6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pdlim2Q8R1G6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Pdlim2Q8R1G6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pdlim2Q8R1G6 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pdlim2Q8R1G6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pdlim2Q8R1G6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Pdlim2Q8R1G6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pdlim2Q8R1G6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pdlim2Q8R1G6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
Pdlim2Q8R1G6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pdlim2Q8R1G6 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pdlim2Q8R1G6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.74■■□□□ 1.39
Pdlim2Q8R1G6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pdlim2Q8R1G6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pdlim2Q8R1G6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Pdlim2Q8R1G6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim2Q8R1G6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim2Q8R1G6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim2Q8R1G6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim2Q8R1G6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim2Q8R1G6 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim2Q8R1G6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.73■■□□□ 1.39
Pdlim2Q8R1G6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim2Q8R1G6 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Pdlim2Q8R1G6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Pdlim2Q8R1G6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pdlim2Q8R1G6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pdlim2Q8R1G6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.72■■□□□ 1.39
Pdlim2Q8R1G6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pdlim2Q8R1G6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pdlim2Q8R1G6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Pdlim2Q8R1G6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pdlim2Q8R1G6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pdlim2Q8R1G6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pdlim2Q8R1G6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pdlim2Q8R1G6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Pdlim2Q8R1G6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pdlim2Q8R1G6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pdlim2Q8R1G6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Pdlim2Q8R1G6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.7■■□□□ 1.38
Pdlim2Q8R1G6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pdlim2Q8R1G6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Pdlim2Q8R1G6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pdlim2Q8R1G6 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Pdlim2Q8R1G6 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pdlim2Q8R1G6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pdlim2Q8R1G6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pdlim2Q8R1G6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC23.68■■□□□ 1.38
Pdlim2Q8R1G6 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pdlim2Q8R1G6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pdlim2Q8R1G6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
Pdlim2Q8R1G6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pdlim2Q8R1G6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pdlim2Q8R1G6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pdlim2Q8R1G6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Pdlim2Q8R1G6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pdlim2Q8R1G6 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pdlim2Q8R1G6 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pdlim2Q8R1G6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pdlim2Q8R1G6 Gm43231-201ENSMUST00000202960 2258 ntBASIC23.67■■□□□ 1.38
Pdlim2Q8R1G6 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pdlim2Q8R1G6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pdlim2Q8R1G6 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.67■■□□□ 1.38
Pdlim2Q8R1G6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Pdlim2Q8R1G6 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Pdlim2Q8R1G6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim2Q8R1G6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim2Q8R1G6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim2Q8R1G6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim2Q8R1G6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.66■■□□□ 1.38
Pdlim2Q8R1G6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Pdlim2Q8R1G6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim2Q8R1G6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
Pdlim2Q8R1G6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim2Q8R1G6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pdlim2Q8R1G6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms