Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.31■□□□□ 0.84
Alms1Q8K4E0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.31■□□□□ 0.84
Alms1Q8K4E0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
Alms1Q8K4E0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Alms1Q8K4E0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Alms1Q8K4E0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alms1Q8K4E0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Alms1Q8K4E0 Gm27405-201ENSMUST00000184201 112 ntBASIC20.3■□□□□ 0.84
Alms1Q8K4E0 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Alms1Q8K4E0 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alms1Q8K4E0 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alms1Q8K4E0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alms1Q8K4E0 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alms1Q8K4E0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Alms1Q8K4E0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Alms1Q8K4E0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Alms1Q8K4E0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Alms1Q8K4E0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alms1Q8K4E0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alms1Q8K4E0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alms1Q8K4E0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.29■□□□□ 0.84
Alms1Q8K4E0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alms1Q8K4E0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alms1Q8K4E0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Alms1Q8K4E0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
Alms1Q8K4E0 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alms1Q8K4E0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Alms1Q8K4E0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Alms1Q8K4E0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Alms1Q8K4E0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alms1Q8K4E0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alms1Q8K4E0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alms1Q8K4E0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alms1Q8K4E0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Alms1Q8K4E0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Alms1Q8K4E0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alms1Q8K4E0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alms1Q8K4E0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Alms1Q8K4E0 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Alms1Q8K4E0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Alms1Q8K4E0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alms1Q8K4E0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alms1Q8K4E0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Alms1Q8K4E0 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Alms1Q8K4E0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alms1Q8K4E0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Alms1Q8K4E0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alms1Q8K4E0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alms1Q8K4E0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Alms1Q8K4E0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alms1Q8K4E0 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alms1Q8K4E0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Alms1Q8K4E0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Alms1Q8K4E0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Alms1Q8K4E0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Gm8493-201ENSMUST00000196881 489 ntBASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Alms1Q8K4E0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
Alms1Q8K4E0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Alms1Q8K4E0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.21■□□□□ 0.83
Alms1Q8K4E0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alms1Q8K4E0 Gm37179-201ENSMUST00000194862 823 ntBASIC20.21■□□□□ 0.83
Alms1Q8K4E0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Alms1Q8K4E0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Alms1Q8K4E0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.21■□□□□ 0.83
Alms1Q8K4E0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.21■□□□□ 0.83
Alms1Q8K4E0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Alms1Q8K4E0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.83
Alms1Q8K4E0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alms1Q8K4E0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Alms1Q8K4E0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alms1Q8K4E0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alms1Q8K4E0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.2■□□□□ 0.82
Alms1Q8K4E0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Alms1Q8K4E0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms