Protein–RNA interactions for Protein: Q8CE47

Slc49a3, Solute carrier family 49 member A3, mousemouse

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc49a3Q8CE47 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc49a3Q8CE47 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc49a3Q8CE47 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc49a3Q8CE47 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.86■□□□□ 0.61
Slc49a3Q8CE47 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc49a3Q8CE47 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc49a3Q8CE47 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc49a3Q8CE47 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc49a3Q8CE47 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc49a3Q8CE47 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc49a3Q8CE47 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc49a3Q8CE47 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Slc49a3Q8CE47 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc49a3Q8CE47 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc49a3Q8CE47 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc49a3Q8CE47 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc49a3Q8CE47 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc49a3Q8CE47 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Gm11599-201ENSMUST00000118720 878 ntBASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Gm7432-201ENSMUST00000210343 879 ntBASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.84■□□□□ 0.61
Slc49a3Q8CE47 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc49a3Q8CE47 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc49a3Q8CE47 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Slc49a3Q8CE47 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc49a3Q8CE47 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.83■□□□□ 0.6
Slc49a3Q8CE47 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.83■□□□□ 0.6
Slc49a3Q8CE47 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc49a3Q8CE47 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc49a3Q8CE47 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc49a3Q8CE47 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc49a3Q8CE47 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc49a3Q8CE47 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc49a3Q8CE47 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc49a3Q8CE47 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Slc49a3Q8CE47 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.82■□□□□ 0.6
Slc49a3Q8CE47 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc49a3Q8CE47 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc49a3Q8CE47 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc49a3Q8CE47 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc49a3Q8CE47 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc49a3Q8CE47 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Slc49a3Q8CE47 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.81■□□□□ 0.6
Slc49a3Q8CE47 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc49a3Q8CE47 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc49a3Q8CE47 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Slc49a3Q8CE47 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.81■□□□□ 0.6
Slc49a3Q8CE47 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Slc49a3Q8CE47 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc49a3Q8CE47 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc49a3Q8CE47 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc49a3Q8CE47 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Slc49a3Q8CE47 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc49a3Q8CE47 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.8■□□□□ 0.6
Slc49a3Q8CE47 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc49a3Q8CE47 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Slc49a3Q8CE47 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc49a3Q8CE47 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc49a3Q8CE47 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.8■□□□□ 0.6
Slc49a3Q8CE47 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc49a3Q8CE47 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Slc49a3Q8CE47 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc49a3Q8CE47 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Slc49a3Q8CE47 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc49a3Q8CE47 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc49a3Q8CE47 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc49a3Q8CE47 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc49a3Q8CE47 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc49a3Q8CE47 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc49a3Q8CE47 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc49a3Q8CE47 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.78■□□□□ 0.6
Slc49a3Q8CE47 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc49a3Q8CE47 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc49a3Q8CE47 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Slc49a3Q8CE47 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc49a3Q8CE47 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc49a3Q8CE47 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc49a3Q8CE47 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc49a3Q8CE47 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Slc49a3Q8CE47 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Slc49a3Q8CE47 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Slc49a3Q8CE47 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc49a3Q8CE47 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.77■□□□□ 0.6
Slc49a3Q8CE47 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc49a3Q8CE47 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc49a3Q8CE47 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.77■□□□□ 0.6
Slc49a3Q8CE47 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Slc49a3Q8CE47 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.77■□□□□ 0.6
Slc49a3Q8CE47 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Slc49a3Q8CE47 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Slc49a3Q8CE47 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms