Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb7Q8CDY9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb7Q8CDY9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhb7Q8CDY9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb7Q8CDY9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb7Q8CDY9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb7Q8CDY9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb7Q8CDY9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb7Q8CDY9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb7Q8CDY9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb7Q8CDY9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Pcdhb7Q8CDY9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb7Q8CDY9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb7Q8CDY9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.53■□□□□ 0.88
Pcdhb7Q8CDY9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhb7Q8CDY9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb7Q8CDY9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb7Q8CDY9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Pcdhb7Q8CDY9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb7Q8CDY9 Gm10232-201ENSMUST00000089221 720 ntBASIC20.52■□□□□ 0.88
Pcdhb7Q8CDY9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.52■□□□□ 0.88
Pcdhb7Q8CDY9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhb7Q8CDY9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb7Q8CDY9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb7Q8CDY9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Pcdhb7Q8CDY9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdhb7Q8CDY9 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb7Q8CDY9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.51■□□□□ 0.87
Pcdhb7Q8CDY9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.51■□□□□ 0.87
Pcdhb7Q8CDY9 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhb7Q8CDY9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdhb7Q8CDY9 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.51■□□□□ 0.87
Pcdhb7Q8CDY9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdhb7Q8CDY9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb7Q8CDY9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb7Q8CDY9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb7Q8CDY9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb7Q8CDY9 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb7Q8CDY9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhb7Q8CDY9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb7Q8CDY9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Pcdhb7Q8CDY9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb7Q8CDY9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb7Q8CDY9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb7Q8CDY9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb7Q8CDY9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb7Q8CDY9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Pcdhb7Q8CDY9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.48■□□□□ 0.87
Pcdhb7Q8CDY9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pcdhb7Q8CDY9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb7Q8CDY9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.47■□□□□ 0.87
Pcdhb7Q8CDY9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb7Q8CDY9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pcdhb7Q8CDY9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb7Q8CDY9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb7Q8CDY9 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb7Q8CDY9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb7Q8CDY9 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb7Q8CDY9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Pcdhb7Q8CDY9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhb7Q8CDY9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb7Q8CDY9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb7Q8CDY9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhb7Q8CDY9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pcdhb7Q8CDY9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb7Q8CDY9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb7Q8CDY9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Pcdhb7Q8CDY9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb7Q8CDY9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb7Q8CDY9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb7Q8CDY9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb7Q8CDY9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb7Q8CDY9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb7Q8CDY9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb7Q8CDY9 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb7Q8CDY9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb7Q8CDY9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb7Q8CDY9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb7Q8CDY9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb7Q8CDY9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb7Q8CDY9 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Pcdhb7Q8CDY9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb7Q8CDY9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.42■□□□□ 0.86
Pcdhb7Q8CDY9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb7Q8CDY9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb7Q8CDY9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb7Q8CDY9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb7Q8CDY9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms